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SCNpilot_cont_500_bf_scaffold_1333_3

Organism: SCNPILOT_CONT_500_BF_Rhodospirillales_70_8

partial RP 30 / 55 MC: 1 BSCG 28 / 51 MC: 1 ASCG 8 / 38
Location: 1362..3233

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BPS0_GRABC similarity UNIREF
DB: UNIREF100
  • Identity: 77.9
  • Coverage: 655.0
  • Bit_score: 981
  • Evalue 3.60e-283
  • rbh
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.6
  • Coverage: 648.0
  • Bit_score: 1014
  • Evalue 5.40e-293
RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor similarity KEGG
DB: KEGG
  • Identity: 77.9
  • Coverage: 655.0
  • Bit_score: 981
  • Evalue 1.10e-283
  • rbh

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Taxonomy

Acidisphaera rubrifaciens → Acidisphaera → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1872
ATGGCGACGAAGCCCAGTGTAGCCGGCGATACGGTCACCGTCGAACAAGACGTCGAGACCACGCTGCTGGACGTCCAGTCCGCCGCGGTGAAGCGGTTGGTCGCGCGCGGCAAGGAGCGCGGCTACATCACCTTCGACGAGCTGAATGCCGTGCTGCCGCCCGACCAGAACAGCAGCGAGCAGATCGAGGACGTGATGGCCAATCTCTCCGAGATGGGTATCCAGGTCGTCGAAAGCGAGGACAACGAGGACGGCGAGGCCCCGGTCGCCAAGGCCGAGAAGGCCGAGGAAGCCGAAGAGGAAGAGCAGACCGGCAACGTCGACGAGGCCAGTCTCGGCCGCACCGACGACCCGGTCCGCATGTACCTGCGCGAGATGGGCAGCGTCGAGCTGCTGTCCCGCGAGGGCGAGATCGCGATCGCCAAGCGCATCGAGGCCGGCCGCGACATGATGATCAACGGGCTCTGCGAGAGCCCGTTGACCTTCAAGGCGATCATTTCCTGGCACGACCAGCTCAAGGCCGGCCGGATGCTGCTGCGCGACATCATCGACCTGGAAGCGACGGAGGGCGCCGGCAACGTCTCCGACGAGCCGGCCGAGGGTGCCACCGACAGCTTCGCCGCGAACGACGATTCCGACGGTGACGAGGAGGGCGAAGGCCCCGGCATGTCGCTCTCCGCGCTCGAGGAGAAGCTGAAGCCGGAAGTGCTGGCCACCTTCGAGGAAATCGAGGCGCTGTACAAGAAGCTGCACAAGATGCAGCATCGCCGGCTCGAGAGCATCACCAGCGGTGAGGACGTCTCCTCCCGCTCCGAGAAGACCTATGAGAAGGCGCGCGAGGAGCTGGTCCAGAAGGTCGGCCAGGTCCGCCTGCACAACAACCGGATCGAGGAGCTGGTCACCCAGCTCAAGCAGCTCAACCAGCGCCTGACGACGCTGGAAGGCCAGCTCCTGCGCATGGCCGAGAGCTGCAAGGTCAGCCGCGACGACTTCCTGAAGCAGTATCGCGACCACGAGCTGGATCCGAACTGGCTCGACCGGATCGGCAAGCTGCCCGGCAAGGGGTGGAAGACCTTCGTCGCCAAGCACCCGGACGACATCGGCAACATCCGCGCGCAGATCTCGGCCGTGGCGACCGACGCCTCCCTGCCGATCAGCGAGTTCCGCCGGGTGTTCCAGACCGTCTCCCGCGGTGAGCGCGACAGCGCGCGCGCCAAGAAGGAGATGATCGAGGCGAACCTGCGCCTGGTGATCTCGATCGCCAAGAAGTACACCAACCGCGGCCTGCAGTTCCTGGACCTGATCCAGTTCTCGACCTATGCGACGTGGTGGATCCGGCAGGCCATCACCCGCTCCATCGCCGACCAGGCGCGGACCATCCGCATCCCGGTCCACATGATCGAGACGATCAACAAGCTGGTCCGCACCTCGCGCCAGATGCTGCACGAGATCGGCCGCGAGCCCCAGCCCGAGGAACTCGCCGAGAAGCTCGGCATGCCGCTCGAGAAGGTGCGCAAGGTCCTGAAGATCGCCAAGGAGCCGATCAGCCTCGAAACCCCGATCGGTGACGAGGAAGACAGCCACCTCGGCGACTTCATCGAGGACAAGAACGCGGTCATCCCGCTGGACGCCGCGATCCAGGCGAACCTGCGCGAGGCCACCACCCGCGTGCTGTCCTCCCTGACCCCGCGTGAGGAGCGTGTGCTGCGCATGCGCTTCGGGATCGGCATGAACACCGACCACACGCTGGAAGAGGTCGGCCAGCAGTTCAACGTCACCCGCGAGCGTATCCGCCAGATCGAGGCGAAGGCGCTCCGCAAGCTGAAGCACCCGAGCCGCAGCCGGAAGCTGCGGAGCTTCCTGGACGACTAG
PROTEIN sequence
Length: 624
MATKPSVAGDTVTVEQDVETTLLDVQSAAVKRLVARGKERGYITFDELNAVLPPDQNSSEQIEDVMANLSEMGIQVVESEDNEDGEAPVAKAEKAEEAEEEEQTGNVDEASLGRTDDPVRMYLREMGSVELLSREGEIAIAKRIEAGRDMMINGLCESPLTFKAIISWHDQLKAGRMLLRDIIDLEATEGAGNVSDEPAEGATDSFAANDDSDGDEEGEGPGMSLSALEEKLKPEVLATFEEIEALYKKLHKMQHRRLESITSGEDVSSRSEKTYEKAREELVQKVGQVRLHNNRIEELVTQLKQLNQRLTTLEGQLLRMAESCKVSRDDFLKQYRDHELDPNWLDRIGKLPGKGWKTFVAKHPDDIGNIRAQISAVATDASLPISEFRRVFQTVSRGERDSARAKKEMIEANLRLVISIAKKYTNRGLQFLDLIQFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLVRTSRQMLHEIGREPQPEELAEKLGMPLEKVRKVLKIAKEPISLETPIGDEEDSHLGDFIEDKNAVIPLDAAIQANLREATTRVLSSLTPREERVLRMRFGIGMNTDHTLEEVGQQFNVTRERIRQIEAKALRKLKHPSRSRKLRSFLDD*