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SCNpilot_cont_500_bf_scaffold_6945

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_6945_1
Legionella hackeliae, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..110)
DNA (108bp) protein (36aa)
50S ribosomal protein L20 n=1 Tax=Fluoribacter dumoffii RepID=UPI00026C7F90
rplT; 50S ribosomal protein L20; K02887 large subunit ribosomal protein L20
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=449 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella hackeliae.;"
SCNpilot_cont_500_bf_scaffold_6945_2
Legionella pneumophila, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(125..325)
DNA (201bp) protein (67aa)
50S ribosomal protein L35 n=10 Tax=Legionella pneumophila RepID=RL35_LEGPA
rpmI; 50S ribosomal protein L35
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=446 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella pneumophila.;"
SCNpilot_cont_500_bf_scaffold_6945_3
Legionella longbeachae, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(351..689)
DNA (339bp) protein (113aa)
translation initiation factor IF-3 n=1 Tax=Fluoribacter dumoffii RepID=UPI00030A315B
infC; Translation initiation factor IF-3; K02520 translation initiation factor IF-3
Translation initiation factor IF-3 {ECO:0000256|RuleBase:RU000646, ECO:0000313|EMBL:CBJ10666.1}; TaxID=661367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella longbeachae serogroup 1 (strain NSW150).;"
SCNpilot_cont_500_bf_scaffold_6945_4
Legionella longbeachae, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(908..2827)
DNA (1920bp) protein (640aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=661367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella longbeachae serogroup 1 (strain NSW150).;"
thrS; threonyl-tRNA synthetase; K01868 threonyl-tRNA synthetase [EC:6.1.1.3] rbh
threonyl-tRNA synthetase n=1 Tax=Fluoribacter dumoffii RepID=UPI00026C7F8D rbh
SCNpilot_cont_500_bf_scaffold_6945_trna_1
unknown

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comp(3105..3176)
DNA (72bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_6945_5
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

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3602..4123
DNA (522bp) protein (174aa)
transcriptional regulator n=1 Tax=Legionella shakespearei RepID=UPI00035C1D67
Putative uncharacterized protein {ECO:0000313|EMBL:EHL29949.1}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_6945_6
Legionella longbeachae, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

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4219..4854
DNA (636bp) protein (212aa)
Inner membrane protein n=2 Tax=Legionella longbeachae RepID=D1RC62_LEGLO rbh
hypothetical protein rbh
Putative membrane protein {ECO:0000313|EMBL:CBJ10661.1}; TaxID=661367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella longbeachae serogroup 1 (strain NSW150).;"
SCNpilot_cont_500_bf_scaffold_6945_7
Legionella longbeachae, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4934..5425)
DNA (492bp) protein (164aa)
ppiB; Peptidyl-prolyl cis-trans isomerase B (cyclophilin-type PPIase family); K03768 peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] rbh
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=661367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella longbeachae serogroup 1 (strain NSW150).;"
peptidyl-prolyl cis-trans isomerase n=1 Tax=Fluoribacter dumoffii RepID=UPI00026C7F8A rbh
SCNpilot_cont_500_bf_scaffold_6945_8
Legionella longbeachae, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5532..5846)
DNA (315bp) protein (105aa)
tgt; queuine tRNA-ribosyltransferase; K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29]
Queuine tRNA-ribosyltransferase {ECO:0000256|RuleBase:RU003777, ECO:0000256|SAAS:SAAS00087750}; EC=2.4.2.29 {ECO:0000256|RuleBase:RU003777, ECO:0000256|SAAS:SAAS00087822};; TaxID=661367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella longbeachae serogroup 1 (strain NSW150).;"
queuine tRNA-ribosyltransferase n=1 Tax=Fluoribacter dumoffii RepID=UPI00026C7F89
Displaying 9 items

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