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SCNpilot_cont_500_bf_scaffold_4511

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_4511_1
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(57..893)
DNA (837bp) protein (279aa)
methyltransferase n=1 Tax=Afipia birgiae RepID=UPI0002F96CD7 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS42370.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
putative S-adenosyl-L-methionine (SAM)-dependent methyltransferase rbh
SCNpilot_cont_500_bf_scaffold_4511_2
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1092..2843
DNA (1752bp) protein (584aa)
PAS/PAC sensor hybrid histidine kinase {ECO:0000313|EMBL:ABE61135.1}; EC=2.7.13.3 {ECO:0000313|EMBL:ABE61135.1};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
PAS/PAC sensor hybrid histidine kinase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRL2_NITHX
PAS/PAC sensor hybrid histidine kinase
SCNpilot_cont_500_bf_scaffold_4511_3
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3024..3860
DNA (837bp) protein (279aa)
Signal transduction histidine kinase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WSN0_9BRAD
Signal transduction histidine kinase {ECO:0000313|EMBL:EAQ36975.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
Signal transduction histidine kinase
SCNpilot_cont_500_bf_scaffold_4511_4
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3868..5106)
DNA (1239bp) protein (413aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
fabF2; 3-oxoacyl-[acyl-carrier-protein] synthase FabF (EC:2.3.1.179); K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] rbh
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PIZ5_9BRAD rbh
SCNpilot_cont_500_bf_scaffold_4511_5
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5253..6446)
DNA (1194bp) protein (398aa)
Acetyl-CoA C-acyltransferase/ acetyl-CoA acetyltransferase {ECO:0000313|EMBL:EGP07937.1}; EC=2.3.1.16 {ECO:0000313|EMBL:EGP07937.1};; EC=2.3.1.9 {ECO:0000313|EMBL:EGP07937.1};; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
Acetyl-CoA C-acyltransferase/ acetyl-CoA acetyltransferase n=2 Tax=Bradyrhizobiaceae RepID=F7QLT4_9BRAD rbh
acetyl-CoA C-acetyltransferase rbh
SCNpilot_cont_500_bf_scaffold_4511_6
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6650..7420)
DNA (771bp) protein (257aa)
enoyl-CoA hydratase (EC:4.2.1.17)
enoyl-CoA hydratase n=1 Tax=Afipia birgiae RepID=UPI000301AD0A rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS42375.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
SCNpilot_cont_500_bf_scaffold_4511_7
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7584..8210
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PLC2_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42376.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
regulatory protein TetR
SCNpilot_cont_500_bf_scaffold_4511_8
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8333..9436
DNA (1104bp) protein (368aa)
methylmalonate-semialdehyde dehydrogenase; K00140 malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
Methylmalonate-semialdehyde dehydrogenase (Acylating) {ECO:0000313|EMBL:ABE63341.1}; EC=1.2.1.27 {ECO:0000313|EMBL:ABE63341.1};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Methylmalonate-semialdehyde dehydrogenase (Acylating) n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QKA6_NITHX
Displaying 8 items

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