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SCNpilot_cont_500_bf_scaffold_4911

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_4911_1
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..877)
DNA (876bp) protein (292aa)
nuoF3; NADH-quinone oxidoreductase subunit F (EC:1.6.99.5); K00335 NADH-quinone oxidoreductase subunit F [EC:1.6.5.3]
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NQ81_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS29655.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
SCNpilot_cont_500_bf_scaffold_4911_2
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1452..3089)
DNA (1638bp) protein (546aa)
fdhA3; formate dehydrogenase subunit alpha FdhA (EC:1.2.1.2); K00123 formate dehydrogenase, alpha subunit [EC:1.2.1.2]
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NKL6_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS29656.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
SCNpilot_cont_500_bf_scaffold_4911_3
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3174..3434)
DNA (261bp) protein (87aa)
formate dehydrogenase H (EC:1.2.1.2)
Molybdopterin oxidoreductase n=1 Tax=Afipia sp. 1NLS2 RepID=D6VA05_9BRAD
Molybdopterin oxidoreductase {ECO:0000313|EMBL:EFI50299.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
SCNpilot_cont_500_bf_scaffold_4911_4
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3776..5191
DNA (1416bp) protein (472aa)
L-seryl-tRNA(Sec) selenium transferase {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029253}; EC=2.9.1.1 {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029254};; Selenocysteine synthase {ECO:0000256|HAMAP-Rule:MF_00423}; Selenocysteinyl-tRNA(Sec) synthase {ECO:0000256|HAMAP-Rule:MF_00423}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
selA; L-seryl-tRNA selenium transferase SelA (EC:2.9.1.1); K01042 L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] rbh
L-seryl-tRNA(Sec) selenium transferase n=1 Tax=Afipia felis ATCC 53690 RepID=K8NQ07_AFIFE rbh
SCNpilot_cont_500_bf_scaffold_4911_5
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5205..6254)
DNA (1050bp) protein (350aa)
Selenide, water dikinase {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883}; EC=2.7.9.3 {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883};; Selenium donor protein {ECO:0000256|HAMAP-Rule:MF_00625}; Selenophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00625}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
selD; selenophosphate synthase SelD (EC:2.7.9.3); K01008 selenide, water dikinase [EC:2.7.9.3]
Selenide, water dikinase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V2W8_9BRAD rbh
SCNpilot_cont_500_bf_scaffold_4911_6
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6826..7155
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NKM0_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS29661.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
thioredoxin family protein
SCNpilot_cont_500_bf_scaffold_4911_7
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7258..8205
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NGN6_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS29662.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
transglutaminase
SCNpilot_cont_500_bf_scaffold_4911_trna_1
unknown

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comp(9102..9173)
DNA (72bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_4911_8
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9696..11480
DNA (1785bp) protein (595aa)
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EGP08573.1}; EC=1.3.8.- {ECO:0000313|EMBL:EGP08573.1};; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
Acyl-CoA dehydrogenase n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QJV8_9BRAD rbh
acyl-CoA dehydrogenase
SCNpilot_cont_500_bf_scaffold_4911_9
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11669..12616)
DNA (948bp) protein (316aa)
mhqA; ring-cleaving dioxygenase mhqA (EC:1.13.11.-)
glyoxalase n=1 Tax=Afipia birgiae RepID=UPI00031527BD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS32128.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
SCNpilot_cont_500_bf_scaffold_4911_10
unknown

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comp(12629..12718)
DNA (90bp) protein (30aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_4911_11
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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12752..13516
DNA (765bp) protein (255aa)
Enoyl-CoA hydratase {ECO:0000313|EMBL:EGP08571.1}; EC=4.2.1.17 {ECO:0000313|EMBL:EGP08571.1};; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
enoyl-CoA hydratase n=1 Tax=Afipia birgiae RepID=UPI00031872A1 rbh
enoyl-CoA hydratase/isomerase
SCNpilot_cont_500_bf_scaffold_4911_12
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13554..14483
DNA (930bp) protein (310aa)
acetoin utilization protein n=1 Tax=Afipia birgiae RepID=UPI00030E41F9 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS41309.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_4911_13
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14605..14856
DNA (252bp) protein (84aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
Exodeoxyribonuclease 7 small subunit n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NXG3_9BRAD
exodeoxyribonuclease small subunit
Displaying 14 items

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