ggKbase home page

SCNpilot_cont_500_bf_scaffold_5081

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_5081_1
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..902
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P6S5_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS36454.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein rbh
SCNpilot_cont_500_bf_scaffold_5081_2
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

899..1084
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PA24_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS36455.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_cont_500_bf_scaffold_5081_3
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1087..2157
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P4N9_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS36456.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein
SCNpilot_cont_500_bf_scaffold_5081_4
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2683..3423
DNA (741bp) protein (247aa)
ABC transporter substrate-binding protein n=2 Tax=Bradyrhizobiaceae RepID=F7QQY8_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS35696.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
branched chain amino-acid ABC transporter substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein
SCNpilot_cont_500_bf_scaffold_5081_5
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3583..4422
DNA (840bp) protein (280aa)
ABC transporter substrate-binding protein n=2 Tax=Bradyrhizobiaceae RepID=F7QQY9_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS35697.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
ABC transporter; K01996 branched-chain amino acid transport system ATP-binding protein rbh
SCNpilot_cont_500_bf_scaffold_5081_6
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4525..5757
DNA (1233bp) protein (411aa)
Phenylacetate-coenzyme A ligase {ECO:0000313|EMBL:EGP06357.1}; EC=6.2.1.30 {ECO:0000313|EMBL:EGP06357.1};; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
putative phenylacetate-CoA ligase; K01912 phenylacetate-CoA ligase [EC:6.2.1.30]
Phenylacetate-coenzyme A ligase n=2 Tax=Bradyrhizobiaceae RepID=F7QQZ0_9BRAD rbh
SCNpilot_cont_500_bf_scaffold_5081_7
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5803..7008
DNA (1206bp) protein (402aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PA29_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS36460.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
L-carnitine dehydratase/bile acid-inducible protein F
SCNpilot_cont_500_bf_scaffold_5081_8
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7072..8406)
DNA (1335bp) protein (445aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P2L5_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS35701.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_5081_9
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8640..8930
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NZE8_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS35702.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_5081_10
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8843..9682)
DNA (840bp) protein (280aa)
Indoleacetamide hydrolase {ECO:0000313|EMBL:EGP06361.1}; EC=3.5.1.- {ECO:0000313|EMBL:EGP06361.1};; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
amidase; K01426 amidase [EC:3.5.1.4]
Indoleacetamide hydrolase n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QQZ4_9BRAD
SCNpilot_cont_500_bf_scaffold_5081_11
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9757..10122)
DNA (366bp) protein (122aa)
amidase; K01426 amidase [EC:3.5.1.4]
amidase n=1 Tax=Afipia birgiae RepID=UPI0002F97496
Uncharacterized protein {ECO:0000313|EMBL:EKS36463.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_cont_500_bf_scaffold_5081_12
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10287..10559
DNA (273bp) protein (91aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002D824DC
Uncharacterized protein {ECO:0000313|EMBL:EKS36464.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_cont_500_bf_scaffold_5081_13
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11059..12573)
DNA (1515bp) protein (505aa)
Tricarboxylate transport membrane protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QQZ7_9BRAD rbh
Tricarboxylate transport membrane protein {ECO:0000313|EMBL:EGP06364.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_5081_14
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12595..13137)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P4P9_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS36466.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
conserved membrane hypothetical protein
SCNpilot_cont_500_bf_scaffold_5081_15
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13221..14204)
DNA (984bp) protein (328aa)
tricarboxylate transporter n=1 Tax=Afipia birgiae RepID=UPI00031C13EB rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS36467.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_5081_16
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14316..15008)
DNA (693bp) protein (231aa)
Serine--glyoxylate aminotransferase {ECO:0000313|EMBL:EGP06367.1}; EC=2.6.1.45 {ECO:0000313|EMBL:EGP06367.1};; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein; K00830 alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
serine--glyoxylate aminotransferase n=1 Tax=Afipia birgiae RepID=UPI0002D6CB00
SCNpilot_cont_500_bf_scaffold_5081_17
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15008..15478)
DNA (471bp) protein (157aa)
serine--glyoxylate aminotransferase (sgat) (EC:2.6.1.45); K00830 alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
serine--glyoxylate aminotransferase n=1 Tax=Afipia birgiae RepID=UPI0002D6CB00
Uncharacterized protein {ECO:0000313|EMBL:EKS36468.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_cont_500_bf_scaffold_5081_18
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16045..16341
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P6U0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS36469.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
putative transcriptional regulatory protein, GntR family
SCNpilot_cont_500_bf_scaffold_5081_19
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16541..16675
DNA (135bp) protein (45aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PA37_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS36470.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
Displaying 19 items

View Taxonomy