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SCNpilot_cont_500_bf_scaffold_7624

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_7624_1
unknown

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comp(3..83)
DNA (81bp) protein (27aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_7624_2
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(162..1076)
DNA (915bp) protein (305aa)
Transcriptional regulator, LysR family n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JVI5_HYPDA rbh
LysR family transcriptional regulator rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ADJ24839.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
SCNpilot_cont_500_bf_scaffold_7624_3
unknown

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1204..1908
DNA (705bp) protein (235aa)
Putative Quercetin 2,3-dioxygenase {ECO:0000313|EMBL:CPR16913.1}; EC=1.13.11.24 {ECO:0000313|EMBL:CPR16913.1};; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
hypothetical protein n=1 Tax=Methylocystis parvus RepID=UPI00036B9969 rbh
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_7624_4
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2036..2638
DNA (603bp) protein (201aa)
NAD(P)H dehydrogenase (quinone) {ECO:0000256|HAMAP-Rule:MF_01017, ECO:0000256|SAAS:SAAS00064138}; EC=1.6.5.2 {ECO:0000256|HAMAP-Rule:MF_01017, ECO:0000256|SAAS:SAAS00064138};; NAD(P)H:quinone oxidoreductase {ECO:0000256|HAMAP-Rule:MF_01017}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
NAD(P)H dehydrogenase (quinone) n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JVI6_HYPDA
flavoprotein WrbA; K03809 Trp repressor binding protein
SCNpilot_cont_500_bf_scaffold_7624_5
Celeribacter indicus, Celeribacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2756..3052
DNA (297bp) protein (99aa)
acetyltransferase n=1 Tax=Citromicrobium bathyomarinum RepID=UPI0001DD06F8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJE46687.1}; TaxID=1208324 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Celeribacter.;" source="Celeribacter indicus.;"
SCNpilot_cont_500_bf_scaffold_7624_6
unknown

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comp(3067..3756)
DNA (690bp) protein (230aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00036D01A9
Pilus (Caulobacter type) biogenesis lipoprotein CpaD {ECO:0000313|EMBL:CPR18915.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
pilus (Caulobacter type) biogenesis lipoprotein CpaD; K02281 pilus assembly protein CpaD
SCNpilot_cont_500_bf_scaffold_7624_7
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3792..4073)
DNA (282bp) protein (94aa)
Type II and III secretion system protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11B61_MESSB
Putative Pilus assembly protein cpaC signal peptide {ECO:0000313|EMBL:KFC70936.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
type II and III secretion system protein; K02280 pilus assembly protein CpaC
SCNpilot_cont_500_bf_scaffold_7624_8
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4061..5410)
DNA (1350bp) protein (450aa)
Type II and III secretion system protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HPM3_PARL1
type II and III secretion system protein; K02280 pilus assembly protein CpaC
Type II and III secretion system protein {ECO:0000313|EMBL:ABS61856.1}; Flags: Precursor;; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
Displaying 8 items

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