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SCNpilot_cont_500_bf_scaffold_2992

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2992_1
Bradyrhizobium sp. S23321, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..141
DNA (141bp) protein (47aa)
ahcY; adenosylhomocysteinase; K01251 adenosylhomocysteinase [EC:3.3.1.1]
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrolase {ECO:0000256|HAMAP-Rule:MF_00563}; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. S23321.;"
Adenosylhomocysteinase n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0G426_9BRAD
SCNpilot_cont_500_bf_scaffold_2992_2
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(331..570)
DNA (240bp) protein (80aa)
Uncharacterized protein n=2 Tax=Bradyrhizobiaceae RepID=K8P4K5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EGP06635.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2992_3
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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822..1058
DNA (237bp) protein (79aa)
Cold shock protein CspC n=2 Tax=Bradyrhizobiaceae RepID=F7QQM0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS35658.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
cold-shock DNA-binding domain-containing protein; K03704 cold shock protein (beta-ribbon, CspA family)
SCNpilot_cont_500_bf_scaffold_2992_4
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1324..1920)
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07KD9_RHOP5
hypothetical protein; K08995 putative membrane protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ07595.1}; Flags: Precursor;; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
SCNpilot_cont_500_bf_scaffold_2992_5
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2102..3067
DNA (966bp) protein (322aa)
Arginase {ECO:0000256|RuleBase:RU361159}; EC=3.5.3.1 {ECO:0000256|RuleBase:RU361159};; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
arginase; K01476 arginase [EC:3.5.3.1] rbh
Arginase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P1F5_9BRAD rbh
SCNpilot_cont_500_bf_scaffold_2992_6
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3077..3985)
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PG76_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS37373.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2992_7
unknown

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4227..4403
DNA (177bp) protein (59aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2992_8
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4495..5790
DNA (1296bp) protein (432aa)
amidase; K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P7M7_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS35650.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
SCNpilot_cont_500_bf_scaffold_2992_9
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5928..6617)
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P4J2_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS35649.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
fumarylacetoacetate (FAA) hydrolase rbh
SCNpilot_cont_500_bf_scaffold_2992_10
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6753..7766)
DNA (1014bp) protein (338aa)
galE; UDP-galactose 4-epimerase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2]
UDP-glucose 4-epimerase n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NZ86_9BRAD rbh
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EKS35647.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
SCNpilot_cont_500_bf_scaffold_2992_11
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7990..8934
DNA (945bp) protein (315aa)
rfaC; lipopolysaccharide heptosyltransferase I (EC:2.4.-.-); K02841 heptosyltransferase I [EC:2.4.-.-] rbh
glycosyl transferase family 1 n=1 Tax=Afipia birgiae RepID=UPI000315424E rbh
Lipopolysaccharide heptosyltransferase I {ECO:0000313|EMBL:EKS35646.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
SCNpilot_cont_500_bf_scaffold_2992_12
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9141..9656)
DNA (516bp) protein (172aa)
D,D-heptose 1,7-bisphosphate phosphatase {ECO:0000256|PIRNR:PIRNR004682}; EC=3.1.3.- {ECO:0000256|PIRNR:PIRNR004682};; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
HAD family hydrolase; K03273 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D,D-heptose 1,7-bisphosphate phosphatase n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QQK7_9BRAD rbh
SCNpilot_cont_500_bf_scaffold_2992_13
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9653..10246)
DNA (594bp) protein (198aa)
Phosphoheptose isomerase {ECO:0000256|HAMAP-Rule:MF_00067, ECO:0000256|SAAS:SAAS00089187}; EC=5.3.1.28 {ECO:0000256|HAMAP-Rule:MF_00067, ECO:0000256|SAAS:SAAS00089180};; Sedoheptulose 7-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00067}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
gmhA; phosphoheptose isomerase GmhA (EC:5.3.1.-); K03271 D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
Phosphoheptose isomerase n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P4I7_9BRAD rbh
SCNpilot_cont_500_bf_scaffold_2992_14
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10335..11396)
DNA (1062bp) protein (354aa)
ADP-heptose-lipooligosaccharide heptosyltransferase II {ECO:0000313|EMBL:EGP06619.1}; EC=2.4.1.- {ECO:0000313|EMBL:EGP06619.1};; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
rfaF; ADP-heptose--LPS heptosyltransferase II (EC:2.-.-.-); K02843 heptosyltransferase II [EC:2.4.-.-]
ADP-heptose-lipooligosaccharide heptosyltransferase II n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QQK5_9BRAD rbh
SCNpilot_cont_500_bf_scaffold_2992_15
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11591..11692
DNA (102bp) protein (34aa)
ADP-L-glycero-D-manno-heptose-6-epimerase {ECO:0000256|SAAS:SAAS00055252}; EC=5.1.3.20 {ECO:0000256|SAAS:SAAS00055236};; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
ADP-L-glycero-D-mannoheptose-6-epimerase n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TR94_9BRAD
SCNpilot_cont_500_bf_scaffold_2992_16
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11692..12504
DNA (813bp) protein (271aa)
ADP-L-glycero-D-manno-heptose-6-epimerase {ECO:0000256|SAAS:SAAS00055252}; EC=5.1.3.20 {ECO:0000256|SAAS:SAAS00055236};; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein; K03274 ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
ADP-glyceromanno-heptose 6-epimerase n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NZ78_9BRAD
SCNpilot_cont_500_bf_scaffold_2992_17
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12525..13277
DNA (753bp) protein (251aa)
Bifunctional protein HldE n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QQK3_9BRAD
Bifunctional protein HldE {ECO:0000256|HAMAP-Rule:MF_01603, ECO:0000256|SAAS:SAAS00015122}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
putative bifunctional protein RfaE
Displaying 17 items

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