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SCNpilot_cont_500_bf_scaffold_16377

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_16377_1
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..188)
DNA (186bp) protein (62aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
valS; valyl-tRNA synthetase (EC:6.1.1.9); K01873 valyl-tRNA synthetase [EC:6.1.1.9]
Valine--tRNA ligase n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QN45_9BRAD
SCNpilot_cont_500_bf_scaffold_16377_2
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(303..1079)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PE79_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS39851.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein; K09991 hypothetical protein
SCNpilot_cont_500_bf_scaffold_16377_3
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1469..2866)
DNA (1398bp) protein (466aa)
channel protein TolC n=1 Tax=Afipia birgiae RepID=UPI000371F167 rbh
TolC family type I secretion outer membrane protein {ECO:0000313|EMBL:EKS39977.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
TolC family type I secretion outer membrane protein; K12340 outer membrane channel protein
SCNpilot_cont_500_bf_scaffold_16377_4
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3075..3689)
DNA (615bp) protein (205aa)
protein-L-isoaspartate(D-aspartate) O-methyltransferase; K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
Protein-L-isoaspartate O-methyltransferase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PGH0_9BRAD rbh
Protein-L-isoaspartate O-methyltransferase {ECO:0000313|EMBL:EKS39849.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_cont_500_bf_scaffold_16377_5
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3886..4161
DNA (276bp) protein (92aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002D356EA
Uncharacterized protein {ECO:0000313|EMBL:EKS39847.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_cont_500_bf_scaffold_16377_trna_1
unknown

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4258..4328
DNA (71bp)
transferRNA
Displaying 6 items

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