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SCNpilot_cont_500_bf_scaffold_9491

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_9491_1
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1539)
DNA (1539bp) protein (513aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PH71_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS42002.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_9491_2
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1864..2790
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PUF6_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS42003.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_9491_3
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2959..3381
DNA (423bp) protein (141aa)
Transcriptional regulator n=2 Tax=Bradyrhizobiaceae RepID=F7QL93_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42772.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
MucR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_9491_4
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3532..3906
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PR38_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42005.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
chromosomal replication initiator, DnaA-like
SCNpilot_cont_500_bf_scaffold_9491_5
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3903..4538
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PKA6_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS42006.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
DNA replication initiation ATPase
SCNpilot_cont_500_bf_scaffold_9491_6
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4542..4775)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PH74_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42007.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
Fe-S metabolism associated SufE; K02426 cysteine desulfuration protein SufE
SCNpilot_cont_500_bf_scaffold_9491_7
unknown

Not on your lists

comp(4769..4879)
DNA (111bp) protein (37aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_9491_8
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4994..5455)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PUG0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42008.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_9491_9
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6053..7678
DNA (1626bp) protein (542aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
multi-sensor signal transduction histidine kinase; K11357 two-component system, cell cycle sensor histidine kinase DivJ [EC:2.7.13.3]
PAS domain S-box protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PMI2_9BRAD rbh
SCNpilot_cont_500_bf_scaffold_9491_10
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7689..8303
DNA (615bp) protein (205aa)
peptidoglycan-binding protein n=1 Tax=Afipia birgiae RepID=UPI0002EBF7DB rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS42010.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_9491_11
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8310..8468)
DNA (159bp) protein (53aa)
Uncharacterized protein n=2 Tax=Bradyrhizobiaceae RepID=K8PWS1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EGP07753.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
SCNpilot_cont_500_bf_scaffold_9491_12
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8530..8877
DNA (348bp) protein (116aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002FD3ADE
Uncharacterized protein {ECO:0000313|EMBL:EGP07754.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_9491_13
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8902..9891)
DNA (990bp) protein (330aa)
flagellar biosynthesis protein FlhF n=1 Tax=Afipia birgiae RepID=UPI0003731E76 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS42012.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_9491_14
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10035..10241
DNA (207bp) protein (69aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI000313E4C1
Uncharacterized protein {ECO:0000313|EMBL:EKS42013.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_9491_15
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10292..10618
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PMI7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42014.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_9491_16
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10578..10913
DNA (336bp) protein (112aa)
signal peptide protein n=1 Tax=Afipia birgiae RepID=UPI0002FE1313
Uncharacterized protein {ECO:0000313|EMBL:EKS42014.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_9491_17
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11031..11375
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PR52_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42015.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_9491_18
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11611..12234
DNA (624bp) protein (208aa)
YjbE family integral membrane protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PKB6_9BRAD rbh
YjbE family integral membrane protein {ECO:0000313|EMBL:EKS42016.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
TerC family integral membrane protein rbh
SCNpilot_cont_500_bf_scaffold_9491_19
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12253..12816)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PH82_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS42017.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_9491_20
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12813..13391)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PUG8_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS42018.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_9491_21
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13416..15023)
DNA (1608bp) protein (536aa)
Transpeptidase / transglycosylase {ECO:0000313|EMBL:EGP07762.1}; EC=2.4.1.129 {ECO:0000313|EMBL:EGP07762.1};; EC=3.4.-.- {ECO:0000313|EMBL:EGP07762.1};; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
1A family penicillin-binding protein; K05366 penicillin-binding protein 1A [EC:2.4.1.- 3.4.-.-]
Transpeptidase / transglycosylase n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QLA9_9BRAD
SCNpilot_cont_500_bf_scaffold_9491_22
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15061..15552)
DNA (492bp) protein (164aa)
penicillin-binding protein 1A; K05366 penicillin-binding protein 1A [EC:2.4.1.- 3.4.-.-]
1A family penicillin-binding protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PWS9_9BRAD
1A family penicillin-binding protein {ECO:0000313|EMBL:EKS42788.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
Displaying 22 items

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