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SCNpilot_cont_500_bf_scaffold_11029

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_11029_1
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..449
DNA (447bp) protein (149aa)
Alpha/beta hydrolase fold protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QPX7_NITHX
alpha/beta hydrolase fold
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:ABE61720.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_11029_2
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(543..2495)
DNA (1953bp) protein (651aa)
Acetyl-coenzyme A synthetase {ECO:0000256|HAMAP-Rule:MF_01123}; Short=AcCoA synthetase {ECO:0000256|HAMAP-Rule:MF_01123};; Short=Acs {ECO:0000256|HAMAP-Rule:MF_01123};; EC=6.2.1.1 {ECO:0000256|HAMAP-Rule:MF_01123};; Acetate--CoA ligase {ECO:0000256|HAMAP-Rule:MF_01123}; Acyl-activating enzyme {ECO:0000256|HAMAP-Rule:MF_01123}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
acetyl-CoA synthetase; K01895 acetyl-CoA synthetase [EC:6.2.1.1] rbh
Acetyl-coenzyme A synthetase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P8W0_9BRAD rbh
SCNpilot_cont_500_bf_scaffold_11029_3
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2661..3041)
DNA (381bp) protein (127aa)
50S ribosomal protein L11 methyltransferase n=1 Tax=Afipia birgiae RepID=UPI00030C5CC1
SAM-dependent methyltransferase {ECO:0000313|EMBL:EGP09453.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_11029_4
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3344..3760)
DNA (417bp) protein (139aa)
ubiquinol-cytochrome C reductase n=1 Tax=Afipia birgiae RepID=UPI0002F04EE4
Uncharacterized protein {ECO:0000313|EMBL:EKS33966.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_11029_5
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3879..4808)
DNA (930bp) protein (310aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00394}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (EC:1.1.1.94); K00057 glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NWU4_9BRAD
SCNpilot_cont_500_bf_scaffold_11029_6
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4810..5898)
DNA (1089bp) protein (363aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00195365}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=883079 species="Bacteria; Proteobacteria; Alphapro
gcp; O-sialoglycoprotein endopeptidase (EC:3.4.24.57); K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57] rbh
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P6A8_9BRAD rbh
SCNpilot_cont_500_bf_scaffold_11029_7
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5990..6736
DNA (747bp) protein (249aa)
Uroporphyrinogen-III synthase {ECO:0000313|EMBL:EGP09458.1}; EC=4.2.1.75 {ECO:0000313|EMBL:EGP09458.1};; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
uroporphyrinogen III synthase HEM4; K01719 uroporphyrinogen-III synthase [EC:4.2.1.75]
Uroporphyrinogen-III synthase n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QHG9_9BRAD rbh
SCNpilot_cont_500_bf_scaffold_11029_8
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6755..7918
DNA (1164bp) protein (388aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P557_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS34780.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_11029_9
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7926..9617
DNA (1692bp) protein (564aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NXQ5_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS33971.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
HemY protein; K02498 HemY protein rbh
SCNpilot_cont_500_bf_scaffold_11029_trna_1
unknown

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9749..9821
DNA (73bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_11029_10
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9977..10852)
DNA (876bp) protein (292aa)
Putative exported protein n=2 Tax=Bordetella bronchiseptica RepID=K0MKG4_BORBM
hypothetical protein
Tax=RBG_16_Gamma2_60_9_curated
SCNpilot_cont_500_bf_scaffold_11029_11
unknown

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11831..11959
DNA (129bp) protein (43aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_11029_12
Bradyrhizobium sp. S23321, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12465..13607)
DNA (1143bp) protein (381aa)
Diguanylate cyclase n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0GEA4_9BRAD rbh
diguanylate cyclase rbh
Diguanylate cyclase {ECO:0000313|EMBL:BAL79091.1}; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. S23321.;"
SCNpilot_cont_500_bf_scaffold_11029_13
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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13799..14173
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002DC771D
Uncharacterized protein {ECO:0000313|EMBL:EKS34789.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
Displaying 14 items

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