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SCNpilot_cont_500_bf_scaffold_8609

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_8609_1
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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2..865
DNA (864bp) protein (288aa)
Dihydrodipicolinate synthase/N-acetylneuraminate lyase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DNH0_SINAD
dihydrodipicolinate synthase/N-acetylneuraminate lyase
Dihydrodipicolinate synthase/N-acetylneuraminate lyase {ECO:0000313|EMBL:AGA30378.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCNpilot_cont_500_bf_scaffold_8609_2
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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962..2257
DNA (1296bp) protein (432aa)
transporter n=1 Tax=Saccharopolyspora spinosa RepID=UPI0002378C3D rbh
Plasmid 9, complete sequence {ECO:0000313|EMBL:AHK36181.1}; TaxID=543736 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus PD630.;"
major facilitator superfamily protein rbh
SCNpilot_cont_500_bf_scaffold_8609_3
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2302..3468)
DNA (1167bp) protein (389aa)
aatA; aspartate aminotransferase; K00812 aspartate aminotransferase [EC:2.6.1.1]
Aspartate aminotransferase n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NYQ3_9BRAD
Aspartate aminotransferase {ECO:0000313|EMBL:EKS35467.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
SCNpilot_cont_500_bf_scaffold_8609_4
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3749..4792
DNA (1044bp) protein (348aa)
Phosphoesterase PA-phosphatase related protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7M7_9BRAD rbh
PAP2 superfamily protein {ECO:0000313|EMBL:CEG09273.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_8609_5
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4929..5600
DNA (672bp) protein (224aa)
glutathione S-transferase-like protein; K00799 glutathione S-transferase [EC:2.5.1.18] rbh
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P2Q3_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS36842.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_cont_500_bf_scaffold_8609_6
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5768..5929
DNA (162bp) protein (54aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PER3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS36843.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_cont_500_bf_scaffold_8609_7
unknown

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5992..6195
DNA (204bp) protein (68aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_8609_8
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6135..6323)
DNA (189bp) protein (63aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00037256AC
Bradyrhizobium elkanii strain UASWS1015 Contig185, whole genome shotgun sequence {ECO:0000313|EMBL:KIU44941.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein; K09922 hypothetical protein
SCNpilot_cont_500_bf_scaffold_8609_9
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6777..7622
DNA (846bp) protein (282aa)
phospholipid/glycerol acyltransferase; K00655 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Afipia birgiae RepID=UPI0002E98A24 rbh
1-acylglycerol-3-phosphate O-acyltransferase {ECO:0000313|EMBL:EKS36847.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_cont_500_bf_scaffold_8609_10
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8731..9972)
DNA (1242bp) protein (414aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P7W2_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS36849.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_8609_11
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9975..11444)
DNA (1470bp) protein (490aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002E6D02C rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS36850.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_8609_12
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11752..12021)
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002DF173D
Membrane protein {ECO:0000313|EMBL:ETR78464.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein; K15383 MtN3 and saliva related transmembrane protein
SCNpilot_cont_500_bf_scaffold_8609_13
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12072..12773)
DNA (702bp) protein (234aa)
glutathione S-transferase n=1 Tax=Afipia birgiae RepID=UPI000362A050 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS36851.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
glutathione S-transferase-like protein
SCNpilot_cont_500_bf_scaffold_8609_14
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12778..13284)
DNA (507bp) protein (169aa)
Glutathione S-transferase {ECO:0000313|EMBL:EGP10169.1}; EC=2.5.1.18 {ECO:0000313|EMBL:EGP10169.1};; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
glutathione S-transferase; K00799 glutathione S-transferase [EC:2.5.1.18]
Glutathione S-transferase n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QF75_9BRAD
Displaying 14 items

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