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SCNpilot_cont_500_bf_scaffold_6052

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_6052_1
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..407)
DNA (405bp) protein (135aa)
5-methyltetrahydrofolate--homocysteine methyltransferase {ECO:0000313|EMBL:EGP08877.1}; EC=2.1.1.13 {ECO:0000313|EMBL:EGP08877.1};; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
metH; methionine synthase MetH (EC:2.1.1.13); K00548 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
5-methyltetrahydrofolate--homocysteine methyltransferase n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QIR4_9BRAD
SCNpilot_cont_500_bf_scaffold_6052_2
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(422..808)
DNA (387bp) protein (129aa)
Uncharacterized protein n=2 Tax=Bradyrhizobiaceae RepID=K8NQA5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS32557.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_6052_3
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(898..1806)
DNA (909bp) protein (303aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
metF; 5,10-methylenetetrahydrofolate reductase (EC:1.5.1.20); K00297 methylenetetrahydrofolate reductase (NADPH) [EC:1.5.1.20] rbh
Methylenetetrahydrofolate reductase n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QIR6_9BRAD rbh
SCNpilot_cont_500_bf_scaffold_6052_4
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2226..3245
DNA (1020bp) protein (340aa)
Putative uncharacterized protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QIR7_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EGP08880.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
luciferase-like protein
SCNpilot_cont_500_bf_scaffold_6052_5
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3403..4266)
DNA (864bp) protein (288aa)
prephenate dehydratase; K04518 prephenate dehydratase [EC:4.2.1.51]
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P6V3_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS34143.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_cont_500_bf_scaffold_6052_6
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4263..5009)
DNA (747bp) protein (249aa)
3-deoxy-manno-octulosonate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008}; EC=2.7.7.38 {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008};; CMP-2-keto-3-deoxyoctulosonic acid synthase {ECO:0000256|HAMAP-Rule:MF_00057}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
3-deoxy-manno-octulosonate cytidylyltransferase; K00979 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
3-deoxy-manno-octulosonate cytidylyltransferase n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NQA9_9BRAD rbh
SCNpilot_cont_500_bf_scaffold_6052_7
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5223..5774
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NY73_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS34141.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
cycM; cytochrome c; K08738 cytochrome c
SCNpilot_cont_500_bf_scaffold_6052_8
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6602..7738
DNA (1137bp) protein (379aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002E80027
Uncharacterized protein {ECO:0000313|EMBL:EKS34140.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
twin-arginine translocation pathway signal; K13893 microcin C transport system substrate-binding protein
SCNpilot_cont_500_bf_scaffold_6052_9
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7735..9642
DNA (1908bp) protein (636aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NYQ5_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS32565.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
ABC transporter substrate-binding protein; K13893 microcin C transport system substrate-binding protein
SCNpilot_cont_500_bf_scaffold_6052_10
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9645..10754
DNA (1110bp) protein (370aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P6U8_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS34138.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
binding-protein-dependent transport systems inner membrane component; K13894 microcin C transport system permease protein rbh
SCNpilot_cont_500_bf_scaffold_6052_11
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10751..11248
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NUY2_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS34137.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
binding-protein-dependent transport systems inner membrane component; K13895 microcin C transport system permease protein
Displaying 11 items

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