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SCNpilot_cont_500_bf_scaffold_6948

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_6948_1
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..890
DNA (888bp) protein (296aa)
Transcriptional regulator, Fis family n=2 Tax=Bradyrhizobiaceae RepID=F7QN34_9BRAD
Transcriptional regulator, Fis family {ECO:0000313|EMBL:EGP07249.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
nitrogen assimilation regulatory protein NtrX; K13599 two-component system, NtrC family, nitrogen regulation response regulator NtrX
SCNpilot_cont_500_bf_scaffold_6948_2
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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894..1751
DNA (858bp) protein (286aa)
D-amino acid aminotransferase; K00824 D-alanine transaminase [EC:2.6.1.21]
D-amino acid aminotransferase n=1 Tax=Afipia birgiae RepID=UPI0002D9847E rbh
D-amino-acid transaminase {ECO:0000313|EMBL:EKS39864.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_cont_500_bf_scaffold_6948_3
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1921..2169
DNA (249bp) protein (83aa)
RNA-binding protein Hfq n=5 Tax=Bradyrhizobiaceae RepID=HFQ_RHOP5
hfq; RNA-binding protein Hfq; K03666 host factor-I protein
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
SCNpilot_cont_500_bf_scaffold_6948_4
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2248..3558
DNA (1311bp) protein (437aa)
GTPase HflX n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QN31_9BRAD rbh
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hflX; GTP-binding proten HflX; K03665 GTP-binding protein HflX rbh
SCNpilot_cont_500_bf_scaffold_6948_5
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3670..5106
DNA (1437bp) protein (479aa)
succinate-semialdehyde dehydrogenase (NAD(P)+) (EC:1.2.1.16); K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16]
Succinate semialdehyde dehydrogenase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QM89_NITHX
Aldehyde dehydrogenase {ECO:0000313|EMBL:KGT80281.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
SCNpilot_cont_500_bf_scaffold_6948_6
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5195..5788)
DNA (594bp) protein (198aa)
mazG; nucleoside triphosphate pyrophosphohydrolase (EC:3.6.1.19); K04765 ATP diphosphatase [EC:3.6.1.8]
Nucleoside triphosphate pyrophosphohydrolase MazG n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QN30_9BRAD
Nucleoside triphosphate pyrophosphohydrolase MazG {ECO:0000313|EMBL:EGP07245.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
SCNpilot_cont_500_bf_scaffold_6948_7
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6017..6547)
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PIV6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41471.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
short-chain dehydrogenase/reductase SDR
SCNpilot_cont_500_bf_scaffold_6948_8
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6535..7023)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PIV6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41471.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
short chain dehydrogenase
SCNpilot_cont_500_bf_scaffold_6948_9
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7113..7835
DNA (723bp) protein (241aa)
7-cyano-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00195886}; EC=6.3.4.20 {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00029421};; 7-cyano-7-carbaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633}; PreQ(0) synthase {ECO:0000256|HAMAP-Rule:MF_01633}; Queuosine biosynthesis protein QueC {ECO:0000256|HAMAP-Rule:MF_01633}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC
7-cyano-7-deazaguanine synthase n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PNL9_9BRAD rbh
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_6948_10
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7835..8392
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PGI2_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS39869.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_6948_11
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8412..8663
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PKA5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS39955.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein; K09984 hypothetical protein
SCNpilot_cont_500_bf_scaffold_6948_12
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8669..9238)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PGQ1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS39954.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
putative Staphylococcus nuclease-like protein (SNase-like)
SCNpilot_cont_500_bf_scaffold_6948_13
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9374..9643
DNA (270bp) protein (90aa)
Putative uncharacterized protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QN25_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EGP07240.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
SCNpilot_cont_500_bf_scaffold_6948_14
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9714..9998)
DNA (285bp) protein (95aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002DBE709
Uncharacterized protein {ECO:0000313|EMBL:EKS42280.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_6948_15
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10349..11518
DNA (1170bp) protein (390aa)
T1SS-143 repeat domain-containing protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NQ64_AFIFE
T1SS-143 repeat domain-containing protein {ECO:0000313|EMBL:EKS28343.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_6948_16
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11561..14785
DNA (3225bp) protein (1075aa)
von Willebrand factor type A n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6A7_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:CDN49613.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
hypothetical protein
Displaying 16 items

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