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SCNpilot_cont_500_bf_scaffold_6172_13

Organism: SCNPILOT_CONT_500_BF_Afipia_63_5

partial RP 23 / 55 MC: 10 BSCG 23 / 51 MC: 9 ASCG 8 / 38 MC: 4
Location: comp(12013..13143)

Top 3 Functional Annotations

Value Algorithm Source
C4-dicarboxylate ABC transporter n=1 Tax=Afipia birgiae RepID=UPI00030F7D0D similarity UNIREF
DB: UNIREF100
  • Identity: 89.8
  • Coverage: 383.0
  • Bit_score: 688
  • Evalue 5.00e-195
  • rbh
Tat (Twin-arginine translocation) pathway signal sequence {ECO:0000313|EMBL:EKS34791.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.0
  • Coverage: 383.0
  • Bit_score: 680
  • Evalue 1.10e-192
TRAP dicarboxylate transporter similarity KEGG
DB: KEGG
  • Identity: 87.7
  • Coverage: 381.0
  • Bit_score: 671
  • Evalue 1.50e-190
  • rbh

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1131
ATGACCAAACGACAAGACAAATCCAGCCGTCGCAACTTTCTGAAGGTTGCCGCGGCAGGCGCAGCCGCGAGCGTCGCGGCGCCGGCCGCGCTCGCGCAGAGCGGCCCGGTTGCCATGCGCTTCCAGAGCACATGGCCGTCGAAGGATATTTTCCACGAATACGCGCTCGATTACGCCAAGAAGGTCAACGACATGACCGGCGGTGATCTCAAGATCGACGTGCTGCCCGCGGGCGCGGTGGTGCCGGCGTTCCAGTTGCTGGAAGCGGTGTCGAAGGGCACGCTCGACGGCGGCCATGGCGTGCTTGCCTATCACTACGGCAAGAGCAATGCGCTGGCGCTGTGGGGATCGGGCCCGGCTTATGCGATGGACGCCAACATGCTGCTGGCCTGGCACAAGTACGGCGGCGGCAAGCAGCTTCTCGAAAAGCTCTACAAGTCGGTCGGCGCCAACGTCGTGTCGTTCCCGTATGGGCCGATGCCGTCGCAGCCGCTCGGCTGGTTCAAGAAGCCGGTGCAGAAGGTCGATGACCTCAAGGGCACCAAGTTCCTCACCGTTGGCACCTCGATCGACGTGTTCACAGGCATGGGTGCTGCGGTGAACGCGCTGCCCGGCGGCGAAATCGTTTCGGCGATGGACCGTGGCCTGCTGGACGCGGCTGAATTCAACAACGCCTCGTCGGACCGCGTGCTCGGCTTCCCGGACGTCTCGAAGGTCTGCATGCTGCAGAGCTATCACCAGAACGCCGAGCAGTTCGAGATCATGTTCAACAAGGCCAAGTACGACGCGCTGCCGCCGAAGATCCAGGCGATCCTCGACAATGCGGCCGAGGCCGCTGGACAGGACATGGCCTGGAAGGCGATCGACCGCTATTCGACCGACTACGCGGAGATGCAGAGCAAGGACAAGGTGAAGTTCTACAAGACGCCTGACTCGGTTCTGCAGAAGCAGCTCGAAATCTACGACGAGGTTGTCGCGAAGAAGTCCGCCGCCGATCCGCTGTTCAAGGAGATCGTCGAATCGCAGCTCGCCTTCGCCAAGCGCGCGACGCAGTGGGAGCAGGACACGGTCACCAACCGCCGCATGGCGTATAACCACTACTTCGGGCCGAACGCCAAGAAGAAGACCTGA
PROTEIN sequence
Length: 377
MTKRQDKSSRRNFLKVAAAGAAASVAAPAALAQSGPVAMRFQSTWPSKDIFHEYALDYAKKVNDMTGGDLKIDVLPAGAVVPAFQLLEAVSKGTLDGGHGVLAYHYGKSNALALWGSGPAYAMDANMLLAWHKYGGGKQLLEKLYKSVGANVVSFPYGPMPSQPLGWFKKPVQKVDDLKGTKFLTVGTSIDVFTGMGAAVNALPGGEIVSAMDRGLLDAAEFNNASSDRVLGFPDVSKVCMLQSYHQNAEQFEIMFNKAKYDALPPKIQAILDNAAEAAGQDMAWKAIDRYSTDYAEMQSKDKVKFYKTPDSVLQKQLEIYDEVVAKKSAADPLFKEIVESQLAFAKRATQWEQDTVTNRRMAYNHYFGPNAKKKT*