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SCNpilot_cont_500_bf_scaffold_6172

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_6172_1
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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102..632
DNA (531bp) protein (177aa)
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
inorganic pyrophosphatase (EC:3.6.1.1); K01507 inorganic pyrophosphatase [EC:3.6.1.1]
Inorganic pyrophosphatase n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NZS0_9BRAD rbh
SCNpilot_cont_500_bf_scaffold_6172_2
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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679..3129
DNA (2451bp) protein (817aa)
peptidase M20; K13049 carboxypeptidase PM20D1 [EC:3.4.17.-]
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P280_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS34804.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_cont_500_bf_scaffold_6172_3
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3107..3430)
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002EE7010
UPF0235 protein HMPREF9695_04711 {ECO:0000256|HAMAP-Rule:MF_00634}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein; K09131 hypothetical protein
SCNpilot_cont_500_bf_scaffold_6172_4
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3470..3760)
DNA (291bp) protein (97aa)
Integral membrane protein YggT n=2 Tax=Bradyrhizobiaceae RepID=F7QHI7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS33985.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
yggt family protein; K02221 YggT family protein
SCNpilot_cont_500_bf_scaffold_6172_trna_1
unknown

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4037..4109
DNA (73bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_6172_5
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4312..4545
DNA (234bp) protein (78aa)
osmotically inducible protein C n=1 Tax=Afipia birgiae RepID=UPI0002F1B5B8
Uncharacterized protein {ECO:0000313|EMBL:EGP09475.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
OsmC-like protein; K06889; K07397 putative redox protein
SCNpilot_cont_500_bf_scaffold_6172_6
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4704..5306
DNA (603bp) protein (201aa)
Putative uncharacterized protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QHI6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EGP09475.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein; K06889; K07397 putative redox protein
SCNpilot_cont_500_bf_scaffold_6172_7
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5512..6345)
DNA (834bp) protein (278aa)
glutamine amidotransferase; K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
GMP synthase n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QHI4_9BRAD rbh
GMP synthase {ECO:0000313|EMBL:EGP09473.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
SCNpilot_cont_500_bf_scaffold_6172_8
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6504..7280)
DNA (777bp) protein (259aa)
Short-chain dehydrogenase n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QHI3_9BRAD rbh
Short-chain dehydrogenase {ECO:0000313|EMBL:EGP09472.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
short-chain dehydrogenase/reductase SDR; K07124
SCNpilot_cont_500_bf_scaffold_6172_9
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7346..7825)
DNA (480bp) protein (160aa)
Putative uncharacterized protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QHI2_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EGP09471.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_6172_10
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8023..9432)
DNA (1410bp) protein (470aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P270_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS34794.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_6172_11
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9523..11268)
DNA (1746bp) protein (582aa)
Possible TRAP C4-dicarboxylate transport system permeaseDctM subunit n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3ME36_RHISN rbh
TRAP C4-dicarboxylate transport system permease subunit DctM rbh
Possible TRAP C4-dicarboxylate transport system permeaseDctM subunit {ECO:0000313|EMBL:ACP25705.1}; TaxID=394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium sp. (strain NGR234).;"
SCNpilot_cont_500_bf_scaffold_6172_12
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11265..11513)
DNA (249bp) protein (83aa)
membrane protein n=1 Tax=Afipia birgiae RepID=UPI0002F7B26D
Uncharacterized protein {ECO:0000313|EMBL:EKS34792.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_6172_13
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12013..13143)
DNA (1131bp) protein (377aa)
C4-dicarboxylate ABC transporter n=1 Tax=Afipia birgiae RepID=UPI00030F7D0D rbh
Tat (Twin-arginine translocation) pathway signal sequence {ECO:0000313|EMBL:EKS34791.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
TRAP dicarboxylate transporter rbh
SCNpilot_cont_500_bf_scaffold_6172_14
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13399..13968)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P266_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS34789.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
Displaying 15 items

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