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SCNpilot_cont_500_bf_scaffold_199

Search features with annotation key words

Displaying items 31-60 of 116 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_199_31
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32514..33641)
DNA (1128bp) protein (376aa)
Extracellular solute-binding protein family 1 n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A6H9_STAND rbh
family 1 extracellular solute-binding protein rbh
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:ADH90177.1}; Flags: Precursor;; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
SCNpilot_cont_500_bf_scaffold_199_32
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33675..34055)
DNA (381bp) protein (127aa)
Cupin 2 conserved barrel domain protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A6I0_STAND
cupin
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:ADH90178.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
SCNpilot_cont_500_bf_scaffold_199_33
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34084..35700)
DNA (1617bp) protein (539aa)
Thiamine biosynthesis Thi4 protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A6I1_STAND rbh
thiamine biosynthesis Thi4 protein rbh
Thiamine biosynthesis Thi4 protein {ECO:0000313|EMBL:ADH90179.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
SCNpilot_cont_500_bf_scaffold_199_34
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35769..36158)
DNA (390bp) protein (130aa)
Aromatic-ring-hydroxylating dioxygenase beta subunit n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A6I2_STAND
aromatic-ring-hydroxylating dioxygenase subunit beta
Aromatic-ring-hydroxylating dioxygenase beta subunit {ECO:0000313|EMBL:ADH90180.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
SCNpilot_cont_500_bf_scaffold_199_35
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36124..36945)
DNA (822bp) protein (274aa)
Transcriptional regulator, IclR family n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A6I3_STAND
IclR family transcriptional regulator
Transcriptional regulator, IclR family {ECO:0000313|EMBL:ADH90181.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
SCNpilot_cont_500_bf_scaffold_199_36
Pantoea sp. At-9b, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37221..38864
DNA (1644bp) protein (548aa)
Xaa-Pro aminopeptidase-like protein n=1 Tax=Pantoea sp. (strain At-9b) RepID=E6WNC5_PANSA rbh
Xaa-Pro aminopeptidase-like protein rbh
Xaa-Pro aminopeptidase-like protein {ECO:0000313|EMBL:ADU72910.1}; TaxID=592316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. (strain At-9b).;"
SCNpilot_cont_500_bf_scaffold_199_37
Pantoea sp. At-9b, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38861..40036
DNA (1176bp) protein (392aa)
Peptidase M20 n=1 Tax=Pantoea sp. (strain At-9b) RepID=E6WNC6_PANSA rbh
peptidase M20 rbh
Peptidase M20 {ECO:0000313|EMBL:ADU72911.1}; TaxID=592316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. (strain At-9b).;"
SCNpilot_cont_500_bf_scaffold_199_38
Pantoea sp. At-9b, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40033..41820
DNA (1788bp) protein (596aa)
Peptidase M28 n=1 Tax=Pantoea sp. (strain At-9b) RepID=E6WNC7_PANSA rbh
peptidase M28 rbh
Peptidase M28 {ECO:0000313|EMBL:ADU72912.1}; TaxID=592316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. (strain At-9b).;"
SCNpilot_cont_500_bf_scaffold_199_39
Pantoea sp. At-9b, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41826..42506
DNA (681bp) protein (227aa)
Putative hydantoin racemase HyuA n=1 Tax=Pantoea sp. (strain At-9b) RepID=E6WNC8_PANSA
putative hydantoin racemase HyuA
Putative hydantoin racemase HyuA {ECO:0000313|EMBL:ADU72913.1}; TaxID=592316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. (strain At-9b).;"
SCNpilot_cont_500_bf_scaffold_199_40
Pantoea sp. At-9b, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42567..43439
DNA (873bp) protein (291aa)
Polysaccharide deacetylase n=1 Tax=Pantoea sp. (strain At-9b) RepID=E6WND4_PANSA rbh
polysaccharide deacetylase rbh
Polysaccharide deacetylase {ECO:0000313|EMBL:ADU72919.1}; TaxID=592316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. (strain At-9b).;"
SCNpilot_cont_500_bf_scaffold_199_41
Pantoea sp. At-9b, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43512..44225)
DNA (714bp) protein (238aa)
Transcriptional regulator, IclR family n=1 Tax=Pantoea sp. (strain At-9b) RepID=E6WNC3_PANSA
transcriptional regulator, IclR family
Transcriptional regulator, IclR family {ECO:0000313|EMBL:ADU72908.1}; TaxID=592316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. (strain At-9b).;"
SCNpilot_cont_500_bf_scaffold_199_42
Pseudomonas sp. CFII64, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44453..46042
DNA (1590bp) protein (530aa)
Extracellular solute-binding protein family 5 n=1 Tax=Pseudomonas sp. CFII64 RepID=S6II44_9PSED
Extracellular solute-binding protein family 5 {ECO:0000313|EMBL:EPJ84734.1}; TaxID=911242 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. CFII64.;"
ABC-type dipeptide transport system, periplasmic component
SCNpilot_cont_500_bf_scaffold_199_43
Marinomonas ushuaiensis, Marinomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46163..47116
DNA (954bp) protein (318aa)
ABC transporter n=1 Tax=Leucothrix mucor RepID=UPI0003B55DC5
ABC transporter {ECO:0000313|EMBL:ETX12174.1}; TaxID=1122207 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Marinomonas.;" source="Marinomonas ushuaiensis DSM 15871.;"
ABC transporter; K02033 peptide/nickel transport system permease protein
SCNpilot_cont_500_bf_scaffold_199_44
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47109..47939
DNA (831bp) protein (277aa)
cytochrome C550 n=1 Tax=Rhizobium leguminosarum RepID=UPI0003614979
ABC-type dipeptide/oligopeptide/nickel transport systems, permease component
ABC-type dipeptide/oligopeptide/nickel transport system, permease component {ECO:0000313|EMBL:EJJ31649.1}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
SCNpilot_cont_500_bf_scaffold_199_45
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47949..49775
DNA (1827bp) protein (609aa)
glutathione ABC transporter ATP-binding protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI00036DB805
Peptide ABC transporter {ECO:0000313|EMBL:KJC56618.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
ABC transporter ATP-binding protein
SCNpilot_cont_500_bf_scaffold_199_46
Defluviimonas sp. 20V17, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49793..50842
DNA (1050bp) protein (350aa)
Ornithine cyclodeaminase {ECO:0000313|EMBL:KDB04094.1}; EC=4.3.1.12 {ECO:0000313|EMBL:KDB04094.1};; TaxID=1417296 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Defluviimonas.;" source="Defluviimonas sp. 20V17.;"
arcB1; ornithine cyclodeaminase (EC:4.3.1.12); K01750 ornithine cyclodeaminase [EC:4.3.1.12]
Ornithine cyclodeaminase-1 n=5 Tax=Rhodobacter capsulatus RepID=D5AV61_RHOCB
SCNpilot_cont_500_bf_scaffold_199_47
bacterium YEK0313, Bacteria

Not on your lists

comp(50899..51309)
DNA (411bp) protein (137aa)
Phenylacetic acid degradation-related protein n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q13BQ0_RHOPS
Uncharacterized protein {ECO:0000313|EMBL:CEJ10259.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
phenylacetic acid degradation-like protein
SCNpilot_cont_500_bf_scaffold_199_48
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51306..52319)
DNA (1014bp) protein (338aa)
Zinc-binding dehydrogenase n=32 Tax=Bordetella RepID=F4LDL3_BORPC
zinc-binding dehydrogenase
Putative chlorophyll synthesis pathway protein BchC {ECO:0000313|EMBL:KDD59704.1}; TaxID=1331242 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica OSU553.;"
SCNpilot_cont_500_bf_scaffold_199_49
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52316..53839)
DNA (1524bp) protein (508aa)
Long-chain-fatty-acid--CoA ligase n=1 Tax=Rhodovulum sp. PH10 RepID=J9A1R7_9RHOB
acid CoA ligase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_199_50
Pantoea sp. At-9b, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53844..54998)
DNA (1155bp) protein (385aa)
amidohydrolase; K01305 beta-aspartyl-dipeptidase (metallo-type) [EC:3.4.19.-] rbh
Amidohydrolase n=1 Tax=Pantoea sp. (strain At-9b) RepID=E6WNC9_PANSA rbh
Amidohydrolase {ECO:0000313|EMBL:ADU72914.1}; TaxID=592316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. (strain At-9b).;"
SCNpilot_cont_500_bf_scaffold_199_51
Acetobacter tropicalis, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55308..56879)
DNA (1572bp) protein (524aa)
5-oxoprolinase (EC:3.5.2.9); K01474 N-methylhydantoinase B [EC:3.5.2.14]
5-oxoprolinase (ATP-hydrolyzing) n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CGR3_9RHOB rbh
Acetobacter tropicalis DNA, scaffold: scf_atr1_v1067, strain NBRC 16470, whole genome shotgun sequence {ECO:0000313|EMBL:GAL97564.1}; TaxID=104102 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter.;" source="Acetobacter tropicalis.;"
SCNpilot_cont_500_bf_scaffold_199_52
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56883..57980)
DNA (1098bp) protein (366aa)
peptidase M24 n=1 Tax=gamma proteobacterium SCGC AB-629-P17 RepID=UPI000369AB56 rbh
Peptidase M24 {ECO:0000313|EMBL:KGM31871.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
peptidase M24 rbh
SCNpilot_cont_500_bf_scaffold_199_53
Oceanicola granulosus, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58035..58871)
DNA (837bp) protein (279aa)
Hydantoin racemase n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CGR1_9RHOB rbh
Hydantoin racemase {ECO:0000313|EMBL:EAR51874.1}; TaxID=314256 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola granulosus (strain ATCC BAA-861 / DSM 15982 / KCTC 12143 /; HTCC2516).;"
hydantoin racemase
SCNpilot_cont_500_bf_scaffold_199_54
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58898..60559)
DNA (1662bp) protein (554aa)
N-methylhydantoinase B {ECO:0000313|EMBL:CDP52645.1}; EC=3.5.2.14 {ECO:0000313|EMBL:CDP52645.1};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
N-methylhydantoinase B (HuyB-1); K01474 N-methylhydantoinase B [EC:3.5.2.14] rbh
hypothetical protein n=1 Tax=gamma proteobacterium SCGC AB-629-P17 RepID=UPI0003611228 rbh
SCNpilot_cont_500_bf_scaffold_199_55
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(60571..62646)
DNA (2076bp) protein (692aa)
N-methylhydantoinase A {ECO:0000313|EMBL:CDP52644.1}; EC=3.5.2.14 {ECO:0000313|EMBL:CDP52644.1};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
N-methylhydantoinase A (HuyA-1) (EC:3.5.2.9); K01473 N-methylhydantoinase A [EC:3.5.2.14]
5-oxoprolinase (ATP-hydrolyzing) n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CGQ9_9RHOB rbh
SCNpilot_cont_500_bf_scaffold_199_56
Oceanicola granulosus, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(62636..63160)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CGQ8_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EAR51877.1}; TaxID=314256 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola granulosus (strain ATCC BAA-861 / DSM 15982 / KCTC 12143 /; HTCC2516).;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_199_57
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(63153..63980)
DNA (828bp) protein (276aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000376E594 rbh
Dipeptide transport ATP-binding protein DppD {ECO:0000313|EMBL:CDP52642.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
dppD; Oligopeptide/dipeptide ABC transporter, ATPase subunit
SCNpilot_cont_500_bf_scaffold_199_58
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(63977..64867)
DNA (891bp) protein (297aa)
Oligopeptide ABC transporter ATP-binding n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CGQ6_9RHOB rbh
Oligopeptide transport ATP-binding protein OppD {ECO:0000313|EMBL:CDP52641.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
oligopeptide/dipeptide ABC transporter, ATPase subunit
SCNpilot_cont_500_bf_scaffold_199_59
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(64864..65697)
DNA (834bp) protein (278aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Rhodobacteraceae bacterium HTCC2083 RepID=B6ATK0_9RHOB rbh
Dipeptide transport system permease protein DppC {ECO:0000313|EMBL:CDP52640.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
ABC transporter; K02034 peptide/nickel transport system permease protein rbh
SCNpilot_cont_500_bf_scaffold_199_60
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(65694..66674)
DNA (981bp) protein (327aa)
Dipeptide transport system permease protein n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CGQ4_9RHOB rbh
Dipeptide transport system permease protein DppB {ECO:0000313|EMBL:CDP52639.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
dppBf; Dipeptide transport system permease protein; K02033 peptide/nickel transport system permease protein
Displaying items 31-60 of 116 in total

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