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SCNpilot_cont_500_bf_scaffold_199

Search features with annotation key words

Displaying items 91-116 of 116 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_199_91
Gluconacetobacter diazotrophicus, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(100292..101812)
DNA (1521bp) protein (507aa)
rbsA; ribose ABC transporter ATP-binding protein rbsA; K10441 ribose transport system ATP-binding protein [EC:3.6.3.17] rbh
ABC transporter related n=2 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=B5ZE88_GLUDA rbh
Putative ribose transport ATP-binding protein rbsA {ECO:0000313|EMBL:CAP56383.1}; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 /; PAl5).;"
SCNpilot_cont_500_bf_scaffold_199_92
Collimonas fungivorans, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

102220..103224
DNA (1005bp) protein (335aa)
LacI-family transcriptional regulator n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0ACI1_COLFT
LacI-family transcriptional regulator; K02529 LacI family transcriptional regulator
LacI-family transcriptional regulator {ECO:0000313|EMBL:AEK62776.1}; TaxID=1005048 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas fungivorans (strain Ter331).;"
SCNpilot_cont_500_bf_scaffold_199_93
Actinoplanes garbadinensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(103286..104044)
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI000361D8CE
ABC transport protein ATP-binding {ECO:0000313|EMBL:ACR33047.1}; TaxID=69485 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes garbadinensis.;"
ABC transporter-like protein
SCNpilot_cont_500_bf_scaffold_199_94
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(104046..105041)
DNA (996bp) protein (332aa)
ribose transporter permease RbsC n=1 Tax=Saccharopolyspora spinosa RepID=UPI000237A7F4
Ribose/xylose/arabinose/galactoside ABC-type transporter permease {ECO:0000313|EMBL:EHH05882.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
rbsC; Ribose transport system permease protein rbsC
SCNpilot_cont_500_bf_scaffold_199_95
Streptomyces iranensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(105029..106030)
DNA (1002bp) protein (334aa)
transporter n=1 Tax=Streptomyces rapamycinicus RepID=UPI0003830704
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:CDR09708.1}; TaxID=576784 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces iranensis.;"
LacI family transcriptional regulator; K10439 ribose transport system substrate-binding protein
SCNpilot_cont_500_bf_scaffold_199_96

Not on your lists

comp(106116..107282)
DNA (1167bp) protein (389aa)
Oxidoreductase domain-containing protein (SoxB) {ECO:0000313|EMBL:AIE91091.1}; EC=1.5.3.1 {ECO:0000313|EMBL:AIE91091.1};; TaxID=1457714 species="Archaea; Euryarchaeota; environmental samples.;" source="uncultured marine group II/III euryarchaeote AD1000_105_G07.;"
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00035E6265
glycine/D-amino acid oxidase, deaminating
SCNpilot_cont_500_bf_scaffold_199_97
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(107375..109123)
DNA (1749bp) protein (583aa)
5-oxoprolinase; K01474 N-methylhydantoinase B [EC:3.5.2.14] id=14430572 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=bin3_NC10 organism_group=NC10
N-methylhydantoinase B/acetone carboxylase, alpha subunit
Tax=CSP1_5_NC10
SCNpilot_cont_500_bf_scaffold_199_98
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(109132..111249)
DNA (2118bp) protein (706aa)
5-oxoprolinase (ATP-hydrolyzing) (EC:3.5.2.9); K01473 N-methylhydantoinase A [EC:3.5.2.14]
5-oxoprolinase (ATP-hydrolyzing) id=3775393 bin=GWF2_Methylomirabilis_70_14 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_70_23_curated
SCNpilot_cont_500_bf_scaffold_199_99
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

111385..112284
DNA (900bp) protein (300aa)
Transcriptional regulator, LysR family n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4ZGF1_9BRAD rbh
transcriptional regulator, LysR family rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:BAM92834.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
SCNpilot_cont_500_bf_scaffold_199_100
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(112424..113065)
DNA (642bp) protein (214aa)
RraA family n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RPY7_9PROT
RraA family {ECO:0000313|EMBL:EFH10634.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_199_101
Haematobacter massiliensis, Haematobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(113102..114307)
DNA (1206bp) protein (402aa)
Aspartate aminotransferase {ECO:0000313|EMBL:KFI29326.1}; EC=2.6.1.1 {ECO:0000313|EMBL:KFI29326.1};; TaxID=195105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Haematobacter.;" source="Haematobacter massiliensis.;"
Aspartate aminotransferase (EC:2.6.1.1) rbh
aspartate aminotransferase n=1 Tax=Martelella mediterranea RepID=UPI00037CC4BA rbh
SCNpilot_cont_500_bf_scaffold_199_102
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(114751..115482)
DNA (732bp) protein (244aa)
Hydantoin racemase {ECO:0000313|EMBL:AAV97429.1}; EC=5.1.99.- {ECO:0000313|EMBL:AAV97429.1};; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3); (Silicibacter pomeroyi).;"
Hydantoin racemase n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LKT4_RUEPO
SCNpilot_cont_500_bf_scaffold_199_103
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(115496..116188)
DNA (693bp) protein (231aa)
UPI0003CE23B4 related cluster n=1 Tax=unknown RepID=UPI0003CE23B4 rbh
Flavin reductase {ECO:0000313|EMBL:ESZ28717.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
flavin reductase-like protein
SCNpilot_cont_500_bf_scaffold_199_104
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(116227..116910)
DNA (684bp) protein (228aa)
UPI0003CF3198 related cluster n=1 Tax=unknown RepID=UPI0003CF3198 rbh
GntR family transcriptional regulator {ECO:0000313|EMBL:ESZ28716.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
transcriptional regulator, GntR family
SCNpilot_cont_500_bf_scaffold_199_105
Litoreibacter arenae, Litoreibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

117135..118697
DNA (1563bp) protein (521aa)
Putative peptide-binding periplasmic ABC transporter protein n=1 Tax=Thalassobacter arenae DSM 19593 RepID=S9QD90_9RHOB rbh
Putative peptide-binding periplasmic ABC transporter protein {ECO:0000313|EMBL:EPX79401.1}; TaxID=1123360 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Litoreibacter.;" source="Litoreibacter arenae DSM 19593.;"
dipeptide ABC transporter; K02035 peptide/nickel transport system substrate-binding protein rbh
SCNpilot_cont_500_bf_scaffold_199_106
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

118767..119738
DNA (972bp) protein (324aa)
Binding-protein-dependent transport systems inner membrane component id=2511080 bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=unknown taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
ABC transporter permease {ECO:0000313|EMBL:KDP73518.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
ABC transporter substrate-binding protein; K02033 peptide/nickel transport system permease protein
SCNpilot_cont_500_bf_scaffold_199_107
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

119750..120691
DNA (942bp) protein (314aa)
ABC transporter permease n=1 Tax=Pseudochrobactrum sp. AO18b RepID=UPI0003A99A2C
Dipeptide ABC transport system permease protein DppC {ECO:0000313|EMBL:AHK45789.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
ABC-type dipeptide/oligopeptide/nickel transport systems, permease component
SCNpilot_cont_500_bf_scaffold_199_108
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

120703..121896
DNA (1194bp) protein (398aa)
UPI0003D03B01 related cluster n=1 Tax=unknown RepID=UPI0003D03B01 rbh
Cytosine deaminase {ECO:0000313|EMBL:ESZ28715.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
amidohydrolase
SCNpilot_cont_500_bf_scaffold_199_109
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

121896..123392
DNA (1497bp) protein (499aa)
ethylammeline chlorohydrolase n=1 Tax=Hoeflea sp. 108 RepID=UPI00037F0BC8
N-ethylammeline chlorohydrolase {ECO:0000313|EMBL:KDP73515.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
N-ethylammeline chlorohydrolase
SCNpilot_cont_500_bf_scaffold_199_110
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

123386..124411
DNA (1026bp) protein (342aa)
Putative peptide ABC transporter, ATP-binding protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LZ78_RHITR rbh
putative peptide ABC transporter, ATP-binding protein rbh
Putative peptide ABC transporter, ATP-binding protein {ECO:0000313|EMBL:AGB75420.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_199_111
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

124408..125439
DNA (1032bp) protein (344aa)
ABC transporter, nucleotide binding/ATPase protein (Oligopeptide) n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UC32_RHIRD
ABC transporter, nucleotide binding/ATPase protein (Oligopeptide) {ECO:0000313|EMBL:CDN94703.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
putative ATP-binding protein of oligopeptide ABC transporter
SCNpilot_cont_500_bf_scaffold_199_112
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(125465..125638)
DNA (174bp) protein (58aa)
EutD n=2 Tax=Rhizobium meliloti RepID=F7XBZ0_SINMM
Xaa-Pro aminopeptidase {ECO:0000313|EMBL:KFC64857.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
eutD2; EutD
SCNpilot_cont_500_bf_scaffold_199_113
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

125705..126283
DNA (579bp) protein (193aa)
Transcriptional regulator n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U906_9RHIZ
Transcriptional regulator {ECO:0000313|EMBL:ENN86723.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
GntR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_199_114
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(126412..127359)
DNA (948bp) protein (316aa)
Stage II sporulation protein E n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CUK9_9RHIZ
Stage II sporulation protein E {ECO:0000313|EMBL:EYR84004.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
PAS/PAC sensor protein
SCNpilot_cont_500_bf_scaffold_199_115
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

127550..128065
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CZ65_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR84003.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_199_116
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

128065..128562
DNA (498bp) protein (166aa)
ubiE2; ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC:2.1.1.-)
Ubiquinone/menaquinone biosynthesis methyltransferase UbiE n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CQ35_9RHIZ
Ubiquinone/menaquinone biosynthesis methyltransferase UbiE {ECO:0000313|EMBL:EYR84002.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Displaying items 91-116 of 116 in total

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