ggKbase home page

SCNpilot_cont_500_bf_scaffold_199_95

Organism: SCNPILOT_CONT_500_BF_Mesorhizobium_64_28

partial RP 27 / 55 MC: 1 BSCG 29 / 51 ASCG 10 / 38 MC: 2
Location: comp(105029..106030)

Top 3 Functional Annotations

Value Algorithm Source
transporter n=1 Tax=Streptomyces rapamycinicus RepID=UPI0003830704 similarity UNIREF
DB: UNIREF100
  • Identity: 33.4
  • Coverage: 293.0
  • Bit_score: 149
  • Evalue 7.40e-33
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:CDR09708.1}; TaxID=576784 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces iranensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 33.8
  • Coverage: 293.0
  • Bit_score: 149
  • Evalue 7.90e-33
LacI family transcriptional regulator; K10439 ribose transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 32.5
  • Coverage: 323.0
  • Bit_score: 146
  • Evalue 1.50e-32

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Streptomyces iranensis → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1002
ATGGTTACCTGTTCATATATGAGGAAGACTATCGCCAGGCTGGCGCTCGGCGTTGCCCTGGGAGGATGTTTTCTGACCGCAGCCCACGCGGCGGATACCGTCATCGGATTTACCTCGAACGGCTTTCAGATCGCGGCCTTGGCTGAAGCCCGCGACGGGGCGATGGAGGAGGCCAAGAAGAAAGGCGTCCGGATCGACTACATCACCGCCAAGGATGCGGCGGACCAGCAGCGCGCCGTCGAAAGTCTCATCGCGAAGCATGTCAGCGTCATCGCCATCGATCCCCTCGATGCGGTTGCGATCTCGGAAAGCGTGCGGGCCGCCAACGAGGCAGGCATTCCCGTGGTGATGTGGGTCGGCAGCGCGAAAGAAGGCAAGGTCGCCGCGACGGTGCTTTCCGATGAAATGACGGGCGGCTACGACATCGCCAAATGGACGTTCGCCAAGATGAGTTCCGGAAAGTTCGCCCTTCTGCAGGGCGACAAGGGCCATCAAGCCGGCGCTCTCAGGGAGAAGGGCGTGCGCAAGGCTCTGACCGAATTTCCGGCCATCACCATGTCCGACTATGGCGAGGCGAAATGGAACCGCGACATCGGCGCCCGCGTGGCGGACAATTTCCTGACCCGGACTCCTGATCTCAAGGCGATCATCGCGTTGAACGACGAGATGGCCTTCGGTGCAATCGCCGCCATGGAGGCGAGGCAATGGCCCCAGCCCATGATCGTGACCGGCTACAACGGCCAGTGCGACGCGCTGAAGAGCGTCCTGGAGGGAGGCAAGCTGTCGGCAACCCTCTATCAGCCGTTCCGCGACATCGGCGCCAAAGTGGTCGATCTCGCCGTGGATATCGTAGCCGGCAAACAGGTGGACCAGACCGTCATGGTCCCTTCGATCGTCGTGGATCCCGAACTGGCGAAGAAGGCGCTTGATGAGACTTCCGCCGATATCTCCTCCGGTCTAAGACATGCGGTCAAGCGGGCAGCGGCGGGATGCAAGAGCTGA
PROTEIN sequence
Length: 334
MVTCSYMRKTIARLALGVALGGCFLTAAHAADTVIGFTSNGFQIAALAEARDGAMEEAKKKGVRIDYITAKDAADQQRAVESLIAKHVSVIAIDPLDAVAISESVRAANEAGIPVVMWVGSAKEGKVAATVLSDEMTGGYDIAKWTFAKMSSGKFALLQGDKGHQAGALREKGVRKALTEFPAITMSDYGEAKWNRDIGARVADNFLTRTPDLKAIIALNDEMAFGAIAAMEARQWPQPMIVTGYNGQCDALKSVLEGGKLSATLYQPFRDIGAKVVDLAVDIVAGKQVDQTVMVPSIVVDPELAKKALDETSADISSGLRHAVKRAAAGCKS*