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SCNpilot_cont_500_bf_scaffold_235

Search features with annotation key words

Displaying items 31-60 of 335 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_235_31
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42161..43414)
DNA (1254bp) protein (418aa)
Acyl-CoA dehydrogenase domain protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IMQ6_XANP2 rbh
acyl-CoA dehydrogenase domain-containing protein rbh
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:ABS69299.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCNpilot_cont_500_bf_scaffold_235_32
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43404..44435)
DNA (1032bp) protein (344aa)
Aminoglycoside phosphotransferase n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IMQ7_XANP2
aminoglycoside phosphotransferase
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:ABS69300.1}; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCNpilot_cont_500_bf_scaffold_235_33
unknown

Not on your lists

comp(44426..44623)
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_235_34
Oceanicola batsensis, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44850..45845
DNA (996bp) protein (332aa)
Alcohol dehydrogenase, zinc-containing n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3U1E5_9RHOB rbh
Alcohol dehydrogenase, zinc-containing {ECO:0000313|EMBL:EAQ02128.1}; TaxID=252305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola batsensis (strain ATCC BAA-863 / DSM 15984 / HTCC2597).;"
alcohol dehydrogenase zinc-binding domain-containing protein
SCNpilot_cont_500_bf_scaffold_235_35
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45858..46697
DNA (840bp) protein (280aa)
Enoyl-CoA hydratase n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TH87_TISMK rbh
enoyl-CoA hydratase rbh
Enoyl-CoA hydratase {ECO:0000313|EMBL:AFK52125.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
SCNpilot_cont_500_bf_scaffold_235_36
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46732..47469)
DNA (738bp) protein (246aa)
Transcriptional regulator, GntR family n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LQE7_RUEPO
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:AAV95793.1}; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3); (Silicibacter pomeroyi).;"
SCNpilot_cont_500_bf_scaffold_235_37
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48201..49097
DNA (897bp) protein (299aa)
Amidohydrolase family protein n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LQE6_RUEPO rbh
amidohydrolase; K07046 rbh
Amidohydrolase family protein {ECO:0000313|EMBL:AAV95794.1}; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3); (Silicibacter pomeroyi).;"
SCNpilot_cont_500_bf_scaffold_235_38
Bacillus firmus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(49140..50030)
DNA (891bp) protein (297aa)
Succinate--CoA ligase (EC:6.2.1.5)
Putative uncharacterized protein n=1 Tax=Bacillus sp. 2_A_57_CT2 RepID=E5WNK8_9BACI
Succinyl-CoA synthetase subunit alpha {ECO:0000313|EMBL:EWG10288.1}; TaxID=1307436 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus firmus DS1.;"
SCNpilot_cont_500_bf_scaffold_235_39
Peptococcaceae bacterium BRH_c23, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(50046..51230)
DNA (1185bp) protein (395aa)
Succinate--CoA ligase (EC:6.2.1.5); K15232 citryl-CoA synthetase large subunit [EC:6.2.1.18]
hypothetical protein n=1 Tax=Brevibacillus sp. phR RepID=UPI00030C4F05
Succinate--CoA ligase {ECO:0000313|EMBL:KJS46250.1}; TaxID=1629714 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c23.;"
SCNpilot_cont_500_bf_scaffold_235_40
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(51463..52497)
DNA (1035bp) protein (345aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component id=4051067 bin=GWF2_Methylomirabilis_70_14 species=Pseudomonas sp. GM67 genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter substrate-binding protein; K02051 NitT/TauT family transport system substrate-binding protein
Tax=GWA2_Rokubacteria_70_23_curated
SCNpilot_cont_500_bf_scaffold_235_41
Achromobacter sp. RTa, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52528..53379)
DNA (852bp) protein (284aa)
ABC transporter permease protein n=1 Tax=Ralstonia sp. PBA RepID=I9BS38_9RALS
ABC transporter permease {ECO:0000313|EMBL:KGD90771.1}; TaxID=1532557 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp. RTa.;"
ABC transporter permease; K02050 NitT/TauT family transport system permease protein
SCNpilot_cont_500_bf_scaffold_235_42
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53379..54191)
DNA (813bp) protein (271aa)
ABC transporter related protein n=1 Tax=Ralstonia sp. PBA RepID=I9W2C0_9RALS
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGF68648.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
ABC transporter ATP-binding protein; K02049 NitT/TauT family transport system ATP-binding protein
SCNpilot_cont_500_bf_scaffold_235_43
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54392..54706
DNA (315bp) protein (105aa)
garD; D-galactarate dehydratase GarD (EC:4.2.1.42); K01685 altronate hydrolase [EC:4.2.1.7]
D-galactarate dehydratase GarD {ECO:0000313|EMBL:AEI76598.1}; EC=4.2.1.42 {ECO:0000313|EMBL:AEI76598.1};; TaxID=1042878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) (Ralstonia; eutropha).;"
D-galactarate dehydratase n=1 Tax=Cupriavidus sp. BIS7 RepID=UPI0002D89354
SCNpilot_cont_500_bf_scaffold_235_44
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54706..55863
DNA (1158bp) protein (386aa)
h16_A1258; D-galactarate dehydratase (EC:4.2.1.42); K01685 altronate hydrolase [EC:4.2.1.7] rbh
D-Galactarate dehydratase n=1 Tax=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) RepID=Q0KC73_CUPNH rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
SCNpilot_cont_500_bf_scaffold_235_45
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55969..57021
DNA (1053bp) protein (351aa)
NAD-dependent dehydratase n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2PM72_9ACTO
NAD-dependent dehydratase {ECO:0000313|EMBL:KGF69773.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_235_46
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(57127..58275)
DNA (1149bp) protein (383aa)
mandelate racemase/muconate lactonizing protein; K01684 galactonate dehydratase [EC:4.2.1.6] rbh
Mandelate racemase/muconate lactonizing protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y089_PEDHD rbh
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:ACU04801.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
SCNpilot_cont_500_bf_scaffold_235_47
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58362..59162)
DNA (801bp) protein (267aa)
Putative hydratase/decarboxylase {ECO:0000313|EMBL:KFC75886.1}; EC=4.1.1.77 {ECO:0000313|EMBL:KFC75886.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hydratase/decarboxylase (EC:4.1.1.77); K01617 4-oxalocrotonate decarboxylase [EC:4.1.1.77]
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003725400
SCNpilot_cont_500_bf_scaffold_235_48
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(59317..60675)
DNA (1359bp) protein (453aa)
Carbamoyl-phosphate synthase, putative n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LQF0_RUEPO rbh
carbamoyl-phosphate synthase rbh
Carbamoyl-phosphate synthase, putative {ECO:0000313|EMBL:AAV95790.1}; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3); (Silicibacter pomeroyi).;"
SCNpilot_cont_500_bf_scaffold_235_49
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(60690..62246)
DNA (1557bp) protein (519aa)
Propionyl-CoA carboxylase, putative n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LQE9_RUEPO rbh
propionyl-CoA carboxylase rbh
Propionyl-CoA carboxylase, putative {ECO:0000313|EMBL:AAV95791.1}; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3); (Silicibacter pomeroyi).;"
SCNpilot_cont_500_bf_scaffold_235_50
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

62372..63922
DNA (1551bp) protein (517aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QG41_RALPI rbh
Uncharacterized protein {ECO:0000313|EMBL:AGW89033.1}; TaxID=1366050 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii DTP0602.;"
carboxyl transferase rbh
SCNpilot_cont_500_bf_scaffold_235_51
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

63947..64168
DNA (222bp) protein (74aa)
Biotin/lipoyl attachment domain-containing protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A2Y0_STAND
biotin/lipoyl attachment domain-containing protein
Biotin/lipoyl attachment domain-containing protein {ECO:0000313|EMBL:ADH87698.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
SCNpilot_cont_500_bf_scaffold_235_52
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(64270..66519)
DNA (2250bp) protein (750aa)
Putative Acetyl-CoA synthetase (ADP-forming) alpha and beta chains n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RHP3_9RHIZ rbh
acyl-CoA synthetase rbh
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
SCNpilot_cont_500_bf_scaffold_235_53
Ponticoccus sp. UMTAT08, Ponticoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(66592..67482)
DNA (891bp) protein (297aa)
Smp-30 gluconolaconase lre domain protein n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9WDT7_9SPHN
Putative gluconolactonase {ECO:0000313|EMBL:KHQ51691.1}; TaxID=1515334 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ponticoccus.;" source="Ponticoccus sp. UMTAT08.;"
putative gluconolactonase
SCNpilot_cont_500_bf_scaffold_235_54
unknown

Not on your lists

67929..68105
DNA (177bp) protein (59aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_235_55
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

68467..69627
DNA (1161bp) protein (387aa)
branched-chain amino acid ABC transporter substrate-binding protein n=1 Tax=Cohnella laeviribosi RepID=UPI000362667D
amino acid ABC transporter substrate-binding protein
Receptor family ligand-binding protein {ECO:0000313|EMBL:KDD59458.1}; TaxID=1331242 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica OSU553.;"
SCNpilot_cont_500_bf_scaffold_235_56
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

69637..70524
DNA (888bp) protein (296aa)
ABC transporter permease n=1 Tax=Pannonibacter phragmitetus RepID=UPI0003633602
Putative Inner-membrane translocator {ECO:0000313|EMBL:CCQ74561.1}; TaxID=1288970 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospira.;" source="Magnetospira sp. QH-2.;"
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein
SCNpilot_cont_500_bf_scaffold_235_57
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

70538..72364
DNA (1827bp) protein (609aa)
hypothetical protein n=1 Tax=Alicyclobacillus pohliae RepID=UPI00037B582D
ABC-type branched-chain amino acid transport system, ATPase component {ECO:0000313|EMBL:EJE51482.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
branched-chain amino acid ABC transporter permease/ATP-binding protein
SCNpilot_cont_500_bf_scaffold_235_58
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

72357..73073
DNA (717bp) protein (239aa)
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6NZ73_9FIRM
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family {ECO:0000313|EMBL:EKP94170.1}; TaxID=867903 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter subterraneus DSM 13965.;"
branched chain amino acid ABC transporter ATP-binding protein; K01996 branched-chain amino acid transport system ATP-binding protein
SCNpilot_cont_500_bf_scaffold_235_59
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

73113..74009
DNA (897bp) protein (299aa)
Isocitrate lyase and phosphorylmutase n=2 Tax=Alicycliphilus denitrificans RepID=E8U1W4_ALIDB
PrpB protein {ECO:0000313|EMBL:BAQ50063.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
isocitrate lyase and phosphorylmutase
SCNpilot_cont_500_bf_scaffold_235_60
Pseudooceanicola atlanticus, Pseudooceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

74009..74776
DNA (768bp) protein (256aa)
Enoyl-CoA hydratase n=1 Tax=Citreicella sp. 357 RepID=I1B0Y4_9RHOB
Enoyl-CoA hydratase {ECO:0000313|EMBL:KGM47038.1}; TaxID=1461694 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola sp. 22II-S11g.;"
enoyl-CoA hydratase
Displaying items 31-60 of 335 in total

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