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SCNpilot_cont_500_bf_scaffold_242

Search features with annotation key words

Displaying items 1-30 of 542 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_242_1
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56..760)
DNA (705bp) protein (235aa)
Chloride channel protein EriC n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KHF6_MESAW
chloride channel protein EriC
Chloride channel protein EriC {ECO:0000313|EMBL:AGB44436.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCNpilot_cont_500_bf_scaffold_242_2
Burkholderia jiangsuensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(963..1121)
DNA (159bp) protein (53aa)
maleylacetoacetate isomerase; K01800 maleylacetoacetate isomerase [EC:5.2.1.2]
Maleylacetoacetate isomerase n=1 Tax=Burkholderia phymatum (strain DSM 17167 / STM815) RepID=B2JCD6_BURP8
Maleylacetoacetate isomerase {ECO:0000313|EMBL:KAK49566.1}; TaxID=1458357 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia jiangsuensis.;"
SCNpilot_cont_500_bf_scaffold_242_3
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1306..2130)
DNA (825bp) protein (275aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036A3A1B rbh
High-affinity iron transporter {ECO:0000313|EMBL:CDH45653.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
iron permease FTR1; K07243 high-affinity iron transporter
SCNpilot_cont_500_bf_scaffold_242_4
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2137..2463)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B096_9PROT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN34152.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
SCNpilot_cont_500_bf_scaffold_242_5
RBG_16_Chloroflexi_57_9_curated, Chloroflexi, Bacteria

Not on your lists

3006..4226
DNA (1221bp) protein (407aa)
PHP domain protein id=4699689 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophothermus lipocalidus genus=Syntrophothermus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
Tax=RBG_16_Chloroflexi_57_9_curated
SCNpilot_cont_500_bf_scaffold_242_6
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4385..4942
DNA (558bp) protein (186aa)
Tyrosine/serine protein phosphatase n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9JZE3_AGRVS
tyrosine/serine protein phosphatase
Tyrosine/serine protein phosphatase {ECO:0000313|EMBL:ACM35255.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;"
SCNpilot_cont_500_bf_scaffold_242_7
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5453..7036
DNA (1584bp) protein (528aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI0003722258
Putative membrane protein {ECO:0000313|EMBL:AID33428.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_242_8
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7135..8262
DNA (1128bp) protein (376aa)
glycosyl transferase family protein; K00721 dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI00036369A5 rbh
GtrA-like family protein {ECO:0000313|EMBL:AID33427.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
SCNpilot_cont_500_bf_scaffold_242_9
Bacillus sp. SJS, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8515..9360
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Bacillus bataviensis LMG 21833 RepID=K6D9L2_9BACI
Membrane protein {ECO:0000313|EMBL:KEZ56894.1}; TaxID=1423321 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. SJS.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_242_10
unknown

Not on your lists

comp(9309..9563)
DNA (255bp) protein (85aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_242_11
R_Deltaproteobacteria_38_15, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9625..10212
DNA (588bp) protein (196aa)
Peptidase M14 carboxypeptidase A n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XPT5_9BACT
peptidase M14 carboxypeptidase A
Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_38_15_curated
SCNpilot_cont_500_bf_scaffold_242_12
unknown

Not on your lists

comp(10221..11186)
DNA (966bp) protein (322aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_242_13
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11607..11861)
DNA (255bp) protein (85aa)
Mlr4467 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98E03_RHILO
hypothetical protein
Mlr4467 protein {ECO:0000313|EMBL:BAB51117.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_cont_500_bf_scaffold_242_14
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12108..14756)
DNA (2649bp) protein (883aa)
ABC transporter integral membrane protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98E04_RHILO rbh
ABC transporter integral membrane protein {ECO:0000313|EMBL:BAB51116.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
ABC transporter; K02004 putative ABC transport system permease protein rbh
SCNpilot_cont_500_bf_scaffold_242_15
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14769..15437)
DNA (669bp) protein (223aa)
ABC transporter, ATP-binding protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98E05_RHILO rbh
ABC transporter ATP-binding protein; K02003 putative ABC transport system ATP-binding protein rbh
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:BAB51115.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_cont_500_bf_scaffold_242_16
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15430..16092)
DNA (663bp) protein (221aa)
ABC transporter ATP-binding protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98E06_RHILO rbh
ABC transporter ATP-binding protein; K02003 putative ABC transport system ATP-binding protein rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:BAB51114.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_cont_500_bf_scaffold_242_17
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16096..16650)
DNA (555bp) protein (185aa)
Putative lipoprotein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98E07_RHILO
lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:BAB51113.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_cont_500_bf_scaffold_242_18
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17348..17842
DNA (495bp) protein (165aa)
penicillin-binding protein 1A n=1 Tax=Streptomyces chartreusis RepID=UPI000262FEA5
transglycosylase
Putative Transglycosylase {ECO:0000313|EMBL:CCH89494.1}; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
SCNpilot_cont_500_bf_scaffold_242_19
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18127..18669)
DNA (543bp) protein (181aa)
UPI0003CF5B3D related cluster n=1 Tax=unknown RepID=UPI0003CF5B3D
Uncharacterized protein {ECO:0000313|EMBL:CDX41227.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_242_20
unknown

Not on your lists

comp(18864..19250)
DNA (387bp) protein (129aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_242_21
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19428..20105
DNA (678bp) protein (226aa)
XRE family transcriptional regulator n=1 Tax=Hoeflea sp. 108 RepID=UPI0003763AF2
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:EGP55462.1}; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens F2.;"
response regulator receiver
SCNpilot_cont_500_bf_scaffold_242_22
Mesorhizobium sp. L2C089B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20092..21444
DNA (1353bp) protein (451aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1287120 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C089B000.;"
Histidine kinase n=1 Tax=Mesorhizobium sp. L2C089B000 RepID=V7H1Y8_9RHIZ
ATPase domain-containing protein
SCNpilot_cont_500_bf_scaffold_242_23
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21460..22194)
DNA (735bp) protein (245aa)
Uncharacterized protein n=2 Tax=Methylobacterium RepID=B1ZCH0_METPB
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EHP94606.1}; TaxID=882800 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens DSM 13060.;"
SCNpilot_cont_500_bf_scaffold_242_24
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22623..22961
DNA (339bp) protein (113aa)
ChrB domain protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EKN0_9RHIZ
ChrB domain protein {ECO:0000313|EMBL:CCV04708.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
ChrB domain-containing protein
SCNpilot_cont_500_bf_scaffold_242_25
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22915..23781
DNA (867bp) protein (289aa)
Major facilitator superfamily MFS_1 n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EK23_9RHIZ
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:CCV04707.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
major facilitator superfamily protein
SCNpilot_cont_500_bf_scaffold_242_26
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23836..24201
DNA (366bp) protein (122aa)
Major facilitator superfamily protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B0C7_9RHIZ
major facilitator superfamily protein
Major facilitator superfamily protein {ECO:0000313|EMBL:AGK56899.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCNpilot_cont_500_bf_scaffold_242_27
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24283..24834
DNA (552bp) protein (184aa)
PAP2 superfamily protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM597 RepID=I9X3T5_RHILT
PAP2 superfamily protein {ECO:0000313|EMBL:EJB03371.1}; TaxID=754764 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM597.;"
PA-phosphatase-like phosphoesterase
SCNpilot_cont_500_bf_scaffold_242_28
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24844..26892
DNA (2049bp) protein (683aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00031FF2A6 rbh
PA-phosphatase-like phosphoesterase
Phosphoesterase PA-phosphatase related {ECO:0000313|EMBL:ACI54466.1}; Flags: Precursor;; TaxID=395492 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM2304).;"
SCNpilot_cont_500_bf_scaffold_242_29
unknown

Not on your lists

comp(27330..27572)
DNA (243bp) protein (81aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_242_30
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27682..27843)
DNA (162bp) protein (54aa)
NADH dehydrogenase; K12141 hydrogenase-4 component F [EC:1.-.-.-]
NADH dehydrogenase (Quinone) {ECO:0000313|EMBL:ABQ29827.1}; EC=1.6.99.5 {ECO:0000313|EMBL:ABQ29827.1};; Flags: Precursor;; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
NADH dehydrogenase n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J4H4_ACIMA
Displaying items 1-30 of 542 in total

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