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SCNpilot_cont_500_bf_scaffold_276

Search features with annotation key words

Displaying items 1-30 of 121 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_276_1
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1667)
DNA (1665bp) protein (555aa)
UPI0003D06883 related cluster n=1 Tax=unknown RepID=UPI0003D06883
Ligand-gated channel {ECO:0000313|EMBL:ESZ25149.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
TonB-dependent heme/hemoglobin receptor family protein; K02014 iron complex outermembrane recepter protein
SCNpilot_cont_500_bf_scaffold_276_2
Mesorhizobium sp. L2C089B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2049..3104
DNA (1056bp) protein (352aa)
Iron transporter n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FIZ4_9RHIZ
Iron transporter {ECO:0000313|EMBL:ESZ06893.1}; TaxID=1287120 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C089B000.;"
hemin-degrading family protein; K07225 putative hemin transport protein
SCNpilot_cont_500_bf_scaffold_276_3
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3303..4202
DNA (900bp) protein (300aa)
Periplasmic binding protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11ID7_MESSB rbh
periplasmic binding protein; K02016 iron complex transport system substrate-binding protein rbh
Periplasmic binding protein {ECO:0000313|EMBL:ABG62838.1}; Flags: Precursor;; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCNpilot_cont_500_bf_scaffold_276_4
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4207..5304
DNA (1098bp) protein (366aa)
Transport system permease protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TJC3_MESCW
transport system permease; K02015 iron complex transport system permease protein
Transport system permease protein {ECO:0000313|EMBL:ADV12563.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_cont_500_bf_scaffold_276_5
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5314..6105
DNA (792bp) protein (264aa)
Hemin import ATP-binding protein HmuV {ECO:0000256|HAMAP-Rule:MF_01718, ECO:0000256|SAAS:SAAS00041307}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01718, ECO:0000256|SAAS:SAAS00041330};; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
ABC transporter; K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34]
Hemin importer ATP-binding subunit n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HSS2_9RHIZ
SCNpilot_cont_500_bf_scaffold_276_6
Ochrobactrum sp. CDB2, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6130..6585)
DNA (456bp) protein (152aa)
transcriptional regulator n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002E5F495
Iron-responsive transcriptional regulator {ECO:0000313|EMBL:EMG52608.1}; TaxID=360313 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. CDB2.;"
rirA; iron-responsive transcriptional regulator; K13772 Rrf2 family transcriptional regulator, iron-responsive regulator
SCNpilot_cont_500_bf_scaffold_276_7
Tatumella morbirosei, Tatumella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6700..7965)
DNA (1266bp) protein (422aa)
dyp-type peroxidase family protein; K15733 dye decolorizing peroxidase [EC:1.11.1.19]
Dyp-type peroxidase family protein n=1 Tax=Serratia sp. M24T3 RepID=I0QX96_9ENTR
Peroxidase {ECO:0000313|EMBL:KKA63544.1}; TaxID=642227 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Tatumella.;" source="Tatumella morbirosei.;"
SCNpilot_cont_500_bf_scaffold_276_8
Tatumella morbirosei, Tatumella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7965..9167)
DNA (1203bp) protein (401aa)
Peptidase M75, Imelysin n=1 Tax=Pantoea sp. (strain At-9b) RepID=E6WIR1_PANSA
Peptidase M75 {ECO:0000313|EMBL:KGD74844.1}; TaxID=642227 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Tatumella.;" source="Tatumella morbirosei.;"
Peptidase M75, Imelysin; K07224 putative lipoprotein
SCNpilot_cont_500_bf_scaffold_276_9
Martelella endophytica, Martelella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9154..10818)
DNA (1665bp) protein (555aa)
Uncharacterized protein n=1 Tax=Serratia sp. ATCC 39006 RepID=V3TIG4_9ENTR rbh
Uncharacterized protein {ECO:0000313|EMBL:AJY45384.1}; TaxID=1486262 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Martelella.;" source="Martelella endophytica.;"
iron permease; K07243 high-affinity iron transporter rbh
SCNpilot_cont_500_bf_scaffold_276_10
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11306..12253
DNA (948bp) protein (316aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HW04_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK55082.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
DMT(drug/metabolite transporter) superfamily permease
SCNpilot_cont_500_bf_scaffold_276_11
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12273..13682)
DNA (1410bp) protein (470aa)
Adenylate/guanylate cyclase {ECO:0000313|EMBL:CAC46580.1}; EC=4.6.1.1 {ECO:0000313|EMBL:CAC46580.1};; TaxID=266834 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium; meliloti).;"
adenylate cyclase n=1 Tax=Rhizobium meliloti RepID=UPI00030E32BB
adenylate/guanylate cyclase
SCNpilot_cont_500_bf_scaffold_276_12
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13826..14287)
DNA (462bp) protein (154aa)
Mlr3256 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98GM7_RHILO
hypothetical protein
Mlr3256 protein {ECO:0000313|EMBL:BAB50189.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_cont_500_bf_scaffold_276_13
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14330..17056)
DNA (2727bp) protein (909aa)
ABC-type multidrug transport system, ATPase and permease component n=1 Tax=Rhizobium sp. AP16 RepID=J2DTM9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:GAJ95267.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;"
multidrug ABC transporter; K02021 putative ABC transport system ATP-binding protein
SCNpilot_cont_500_bf_scaffold_276_14
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17200..18060
DNA (861bp) protein (287aa)
Putative D-tagatose 3-epimerase n=1 Tax=Rhodovulum sp. PH10 RepID=J9A0P8_9RHOB
Xylose isomerase {ECO:0000313|EMBL:KFG70977.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
xylose isomerase
SCNpilot_cont_500_bf_scaffold_276_15
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18078..18728
DNA (651bp) protein (217aa)
Transcriptional regulator, TetR family n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJ78_9BURK
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EIK89268.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
mtrR; transcriptional regulator
SCNpilot_cont_500_bf_scaffold_276_16

Not on your lists

18820..19695
DNA (876bp) protein (292aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI000369F940 rbh
AP endonuclease, family 2 {ECO:0000313|EMBL:BAL56761.1}; TaxID=198431 species="unclassified sequences; environmental samples.;" source="uncultured prokaryote.;"
Sugar phosphate isomerases/epimerases
SCNpilot_cont_500_bf_scaffold_276_17
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19776..20879
DNA (1104bp) protein (368aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002F5EF4F rbh
NAD dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:EIK89269.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_276_18
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20866..21714
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJ80_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK89270.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_276_19
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21714..22760
DNA (1047bp) protein (349aa)
dihydrodipicolinate synthetase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002ED76B6 rbh
dapA; Dihydrodipicolinate synthase rbh
Dihydrodipicolinate synthase {ECO:0000313|EMBL:AFK56149.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
SCNpilot_cont_500_bf_scaffold_276_20
Saccharomonospora cyanea, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22765..23895
DNA (1131bp) protein (377aa)
Mandelate racemase n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2N6A1_9ACTO rbh
Enolase superfamily enzyme related to L-alanine-DL-glutamate epimerase {ECO:0000313|EMBL:EHR60196.1}; Flags: Precursor;; TaxID=882082 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora cyanea NA-134.;"
mandelate racemase/muconate lactonizing protein rbh
SCNpilot_cont_500_bf_scaffold_276_21
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23892..24662
DNA (771bp) protein (257aa)
Abc transporter permease protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJ82_9BURK rbh
Abc transporter permease protein {ECO:0000313|EMBL:EIK89272.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
ABC transporter permease; K02050 NitT/TauT family transport system permease protein
SCNpilot_cont_500_bf_scaffold_276_22
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24682..25677
DNA (996bp) protein (332aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00036A3D70 rbh
membrane lipoprotein lipid attachment site; K02051 NitT/TauT family transport system substrate-binding protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_276_23
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25674..26525
DNA (852bp) protein (284aa)
ABC transporter-like protein {ECO:0000313|EMBL:EIK89274.1}; EC=3.6.1.15 {ECO:0000313|EMBL:EIK89274.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00030D16AC rbh
ABC transporter; K02049 NitT/TauT family transport system ATP-binding protein
SCNpilot_cont_500_bf_scaffold_276_24
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26522..27967
DNA (1446bp) protein (482aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJ86_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:EIK89276.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_276_25
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27951..29366
DNA (1416bp) protein (472aa)
Amidase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJ87_9BURK rbh
Amidase {ECO:0000313|EMBL:EIK89277.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
amidase rbh
SCNpilot_cont_500_bf_scaffold_276_26
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29388..30029)
DNA (642bp) protein (214aa)
urease accessory protein UreG n=1 Tax=Meganema perideroedes RepID=UPI0003658A56 rbh
Urease accessory protein UreG {ECO:0000256|HAMAP-Rule:MF_01389}; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;"
urease accessory protein UreG; K03189 urease accessory protein
SCNpilot_cont_500_bf_scaffold_276_27
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30026..30904)
DNA (879bp) protein (293aa)
hypothetical protein n=1 Tax=Pannonibacter phragmitetus RepID=UPI0003710183
Urease accessory protein UreF {ECO:0000256|HAMAP-Rule:MF_01385}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
Urease accessory protein UreF; K03188 urease accessory protein
SCNpilot_cont_500_bf_scaffold_276_28
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30861..31343)
DNA (483bp) protein (161aa)
Urease accessory protein UreE n=1 Tax=Brucella neotomae 5K33 RepID=C9V8H5_BRUNE
Urease accessory protein UreE {ECO:0000256|HAMAP-Rule:MF_00822, ECO:0000256|SAAS:SAAS00072411}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
ureE; urease accessory protein UreE; K03187 urease accessory protein
SCNpilot_cont_500_bf_scaffold_276_29
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31346..32515)
DNA (1170bp) protein (390aa)
Urease subunit alpha {ECO:0000256|HAMAP-Rule:MF_01953}; EC=3.5.1.5 {ECO:0000256|HAMAP-Rule:MF_01953, ECO:0000256|SAAS:SAAS00033844};; Urea amidohydrolase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01953}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
ureC; urease subunit alpha (EC:3.5.1.5); K01428 urease subunit alpha [EC:3.5.1.5]
UPI0003CE7127 related cluster n=1 Tax=unknown RepID=UPI0003CE7127
SCNpilot_cont_500_bf_scaffold_276_30
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32512..32973)
DNA (462bp) protein (154aa)
Urease subunit alpha {ECO:0000256|HAMAP-Rule:MF_01953}; EC=3.5.1.5 {ECO:0000256|HAMAP-Rule:MF_01953, ECO:0000256|SAAS:SAAS00033844};; Urea amidohydrolase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01953}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
ureC; urease subunit alpha; K01428 urease subunit alpha [EC:3.5.1.5]
Urease subunit alpha n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RSE2_9PROT
Displaying items 1-30 of 121 in total

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