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SCNpilot_cont_500_bf_scaffold_283

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Displaying items 1-30 of 222 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_283_1
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(143..1057)
DNA (915bp) protein (305aa)
IclR helix-turn-helix protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A7W6_9PROT
IclR helix-turn-helix protein {ECO:0000313|EMBL:EHL96209.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
transcriptional regulator, IclR family
SCNpilot_cont_500_bf_scaffold_283_2
Mesorhizobium sp. LNJC394B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1078..2157)
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LNJC394B00 RepID=V7FX95_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESY15329.1}; TaxID=1287274 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC394B00.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_283_3
Burkholderia sp. CCGE1003, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2154..3251)
DNA (1098bp) protein (366aa)
ABC transporter related protein n=1 Tax=Burkholderia sp. (strain CCGE1003) RepID=E1TIM8_BURSG rbh
ABC transporter-like protein; K02052 putative spermidine/putrescine transport system ATP-binding protein rbh
ABC transporter related protein {ECO:0000313|EMBL:ADN61937.1}; TaxID=640512 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. (strain CCGE1003).;"
SCNpilot_cont_500_bf_scaffold_283_4
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3244..4851)
DNA (1608bp) protein (536aa)
long-chain-fatty-acid--CoA ligase; K02182 crotonobetaine/carnitine-CoA ligase [EC:6.2.1.-]
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000379F964
Uncharacterized protein {ECO:0000313|EMBL:GAD23327.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
SCNpilot_cont_500_bf_scaffold_283_5
Burkholderia sp. CCGE1003, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4880..5680)
DNA (801bp) protein (267aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Burkholderia sp. (strain CCGE1003) RepID=E1TIM7_BURSG
binding-protein-dependent transport systems inner membrane component; K02053 putative spermidine/putrescine transport system permease protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADN61936.1}; TaxID=640512 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. (strain CCGE1003).;"
SCNpilot_cont_500_bf_scaffold_283_6
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5691..6614)
DNA (924bp) protein (308aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WRX8_VEREI
binding-protein-dependent transport systems inner membrane component
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABM60385.1}; Flags: Precursor;; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Verminephrobacter eiseniae (strain EF01-2).;"
SCNpilot_cont_500_bf_scaffold_283_7
Burkholderia sp. CCGE1003, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6762..7829)
DNA (1068bp) protein (356aa)
Extracellular solute-binding protein family 1 n=1 Tax=Burkholderia sp. (strain CCGE1003) RepID=E1TIM5_BURSG rbh
extracellular solute-binding protein family 1; K02055 putative spermidine/putrescine transport system substrate-binding protein rbh
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:ADN61934.1}; Flags: Precursor;; TaxID=640512 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. (strain CCGE1003).;"
SCNpilot_cont_500_bf_scaffold_283_8
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7868..9349)
DNA (1482bp) protein (494aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. BT03 RepID=J3BS67_9BURK rbh
PrpD protein {ECO:0000313|EMBL:BAQ49813.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_283_9
Herbaspirillum sp. CF444, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9350..10069)
DNA (720bp) protein (240aa)
Enoyl-CoA hydratase/carnithine racemase n=1 Tax=Herbaspirillum sp. CF444 RepID=J3DA40_9BURK
Enoyl-CoA hydratase/carnithine racemase {ECO:0000313|EMBL:EJL87731.1}; TaxID=1144319 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. CF444.;"
enoyl-CoA hydratase
SCNpilot_cont_500_bf_scaffold_283_10
Sinorhizobium americanum, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10796..11437)
DNA (642bp) protein (214aa)
Uncharacterized protein n=6 Tax=Rhizobium meliloti RepID=F6E3Z3_SINMK
Uncharacterized protein {ECO:0000313|EMBL:KEC78866.1}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium americanum CCGM7.;"
hypothetical protein; K09992 hypothetical protein
SCNpilot_cont_500_bf_scaffold_283_11
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11568..12458)
DNA (891bp) protein (297aa)
PREDICTED: uncharacterized oxidoreductase C115.03-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C18F3E
Oxidoreductase {ECO:0000313|EMBL:KKB77793.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
dehydrogenase
SCNpilot_cont_500_bf_scaffold_283_12
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12487..13560)
DNA (1074bp) protein (358aa)
ATPase component of ABC-type sugar transporter n=1 Tax=Microvirga sp. WSM3557 RepID=I4YQB3_9RHIZ
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KFG69878.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
ABC transporter; K02023 multiple sugar transport system ATP-binding protein
SCNpilot_cont_500_bf_scaffold_283_13
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13568..14458)
DNA (891bp) protein (297aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1XZL1_LEPCP
binding-protein-dependent transport system inner membrane protein; K02026 multiple sugar transport system permease protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ACB36574.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
SCNpilot_cont_500_bf_scaffold_283_14
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14455..15351)
DNA (897bp) protein (299aa)
sugar ABC transporter permease n=1 Tax=Pannonibacter phragmitetus RepID=UPI00038049B8
Permease component of ABC-type sugar transporter {ECO:0000313|EMBL:EIM26157.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
ABC transporter permease; K02025 multiple sugar transport system permease protein
SCNpilot_cont_500_bf_scaffold_283_15
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15404..16648)
DNA (1245bp) protein (415aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI000369CC65
Uncharacterized protein {ECO:0000313|EMBL:EUB98221.1}; Flags: Precursor;; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
sugar ABC transporter periplasmic ligand binding protein; K02027 multiple sugar transport system substrate-binding protein
SCNpilot_cont_500_bf_scaffold_283_16
Streptomyces fulvissimus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16707..18254)
DNA (1548bp) protein (516aa)
Uncharacterized protein {ECO:0000313|EMBL:AGK76312.1}; EC=3.1.6.6 {ECO:0000313|EMBL:AGK76312.1};; TaxID=1303692 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces fulvissimus DSM 40593.;"
Choline-sulfatase n=1 Tax=Streptomyces fulvissimus DSM 40593 RepID=N0CTE4_9ACTO rbh
sulfatase
SCNpilot_cont_500_bf_scaffold_283_17
Streptomyces himastatinicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18263..18877)
DNA (615bp) protein (205aa)
Putative transcriptional regulator, PadR family n=1 Tax=Streptomyces himastatinicus ATCC 53653 RepID=D9WKP3_9ACTO
Putative transcriptional regulator, PadR family {ECO:0000313|EMBL:EFL27733.1}; TaxID=457427 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces himastatinicus ATCC 53653.;"
Transcriptional regulator, PadR family
SCNpilot_cont_500_bf_scaffold_283_18
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18996..19565
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9CLV8_SPHYA
Transposase {ECO:0000313|EMBL:EYR77975.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
transposase IS116/IS110/IS902
SCNpilot_cont_500_bf_scaffold_283_19
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19578..20354)
DNA (777bp) protein (259aa)
Cyclase n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JI03_AGRRK
cyclase
Cyclase {ECO:0000313|EMBL:ETR76546.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
SCNpilot_cont_500_bf_scaffold_283_20
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20391..21371)
DNA (981bp) protein (327aa)
Putative Fumarylacetoacetate hydrolase family protein n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0T523_9BRAD rbh
Isomerase {ECO:0000313|EMBL:ETR76545.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
fumarylacetoacetate (FAA) hydrolase
SCNpilot_cont_500_bf_scaffold_283_21
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21461..22408
DNA (948bp) protein (316aa)
ABC transporter substrate-binding protein n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4Z581_9BRAD
ABC transporter substrate-binding protein
ABC transporter substrate-binding protein {ECO:0000313|EMBL:BAM88217.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
SCNpilot_cont_500_bf_scaffold_283_22
Bradyrhizobium sp. ORS 278, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22405..23127
DNA (723bp) protein (241aa)
Putative transcriptional regulatory protein, GntR family n=1 Tax=Bradyrhizobium sp. (strain ORS278) RepID=A4YZ49_BRASO
GntR family transcriptional regulator
Putative transcriptional regulatory protein, GntR family {ECO:0000313|EMBL:CAL79175.1}; TaxID=114615 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain ORS278).;"
SCNpilot_cont_500_bf_scaffold_283_23
Haematobacter massiliensis, Haematobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23114..23926
DNA (813bp) protein (271aa)
atsC; ABC transporter ATP-binding protein (EC:3.6.3.-); K01552 [EC:3.6.3.-]
Putative ABC transporter (ATP binding protein) n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0T520_9BRAD
ABC transporter {ECO:0000313|EMBL:KFI29941.1}; TaxID=195105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Haematobacter.;" source="Haematobacter massiliensis.;"
SCNpilot_cont_500_bf_scaffold_283_24
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23923..24684
DNA (762bp) protein (254aa)
Putative ABC transporter (Permease protein) n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EP29_BRASB rbh
ABC transporter permease rbh
Putative ABC transporter (Permease protein) {ECO:0000313|EMBL:ABQ37923.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
SCNpilot_cont_500_bf_scaffold_283_25
Bradyrhizobium sp. ORS 278, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24681..25448
DNA (768bp) protein (256aa)
Putative ABC transporter (Permease protein) n=1 Tax=Bradyrhizobium sp. (strain ORS278) RepID=A4YZ52_BRASO rbh
ABC transporter permease rbh
Putative ABC transporter (Permease protein) {ECO:0000313|EMBL:CAL79178.1}; TaxID=114615 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain ORS278).;"
SCNpilot_cont_500_bf_scaffold_283_26
Agrobacterium arsenijevicii, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25554..26492
DNA (939bp) protein (313aa)
3-keto-5-aminohexanoate cleavage protein n=1 Tax=Rhizobium loti RepID=UPI00035DB582
3-keto-5-aminohexanoate cleavage protein {ECO:0000313|EMBL:KJF71676.1}; TaxID=1585697 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. KFB 330.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_283_27
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26505..27518
DNA (1014bp) protein (338aa)
Putative gluconolactonase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IMP7_AZOC5
gluconolactonase
Putative gluconolactonase {ECO:0000313|EMBL:BAF86588.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCNpilot_cont_500_bf_scaffold_283_28
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27710..27961)
DNA (252bp) protein (84aa)
IS21 family transposase n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7U8Z8_RHIRD
istb3; chromosomal replication initiator protein dnaA
Probable IS21 family transposase {ECO:0000313|EMBL:ABA56052.1}; TaxID=707241 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti (strain SM11).;"
SCNpilot_cont_500_bf_scaffold_283_29
Methyloceanibacter caenitepidi, Methyloceanibacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28141..29361
DNA (1221bp) protein (407aa)
Site-specific recombinase, DNA invertase Pin n=1 Tax=Rhizobium sp. CF080 RepID=J3AU77_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:BAQ16621.1}; TaxID=1384459 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" source="Methyloceanibacter caenitepidi.;"
resolvase
SCNpilot_cont_500_bf_scaffold_283_trna_2
unknown

Not on your lists

comp(29683..29755)
DNA (73bp)
transferRNA
Displaying items 1-30 of 222 in total

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