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SCNpilot_cont_500_bf_scaffold_310

Search features with annotation key words

Displaying items 1-30 of 377 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_310_1
Mesorhizobium sp. LSHC412B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56..1015)
DNA (960bp) protein (320aa)
UPI0003CEE440 related cluster n=1 Tax=unknown RepID=UPI0003CEE440
Uncharacterized protein {ECO:0000313|EMBL:ESX91209.1}; TaxID=1287285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC412B00.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_310_2
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1298..1453
DNA (156bp) protein (52aa)
UPF0335 protein MAXJ12_05983 n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HM33_9RHIZ
UPF0335 protein MAXJ12_05983 {ECO:0000256|HAMAP-Rule:MF_00797}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_310_3
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1578..2564
DNA (987bp) protein (329aa)
Phosphoglycerate dehydrogenase-like oxidoreductase n=1 Tax=Rhizobium sp. CF142 RepID=J2AVW7_9RHIZ
Phosphoglycerate dehydrogenase-like oxidoreductase {ECO:0000313|EMBL:EJJ27580.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
phosphoglycerate dehydrogenase-like oxidoreductase rbh
SCNpilot_cont_500_bf_scaffold_310_4
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2561..4195
DNA (1635bp) protein (545aa)
Alcohol dehydrogenase {ECO:0000313|EMBL:EYR78297.1}; EC=1.1.99.- {ECO:0000313|EMBL:EYR78297.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
GMC family oxidoreductase; K00108 choline dehydrogenase [EC:1.1.99.1]
Alcohol dehydrogenase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CZ18_9RHIZ
SCNpilot_cont_500_bf_scaffold_310_5
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4173..5369
DNA (1197bp) protein (399aa)
Probable hydrolase n=1 Tax=alpha proteobacterium BAL199 RepID=A8U387_9PROT rbh
Peptidase M20 {ECO:0000313|EMBL:EZQ17586.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
amidohydrolase rbh
SCNpilot_cont_500_bf_scaffold_310_6
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5380..5781)
DNA (402bp) protein (134aa)
transcriptional regulator; K07305 peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
Methionine sulfoxide reductase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FHI9_9RHIZ
Methionine sulfoxide reductase {ECO:0000313|EMBL:ESX76704.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
SCNpilot_cont_500_bf_scaffold_310_7
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5894..7339)
DNA (1446bp) protein (482aa)
UPI0003D025A8 related cluster n=1 Tax=unknown RepID=UPI0003D025A8
Sodium:proton antiporter {ECO:0000313|EMBL:ESZ27208.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
Na+/H+ antiporter NhaD-like permease
SCNpilot_cont_500_bf_scaffold_310_8
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7635..8231)
DNA (597bp) protein (199aa)
VWA containing CoxE family protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HM06_9RHIZ
VWA containing CoxE family protein {ECO:0000313|EMBL:EHK58198.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein; K09989 hypothetical protein
SCNpilot_cont_500_bf_scaffold_310_9
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8249..8764)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YFL2_MESOW
Uncharacterized protein {ECO:0000313|EMBL:CDX25268.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
hypothetical protein; K09989 hypothetical protein
SCNpilot_cont_500_bf_scaffold_310_10
Thioclava dalianensis, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8899..10197
DNA (1299bp) protein (433aa)
ABC transporter substrate binding protein Branched chain amino acid n=1 Tax=Salinisphaera shabanensis E1L3A RepID=U2FVW1_9GAMM
ABC transporter permease {ECO:0000313|EMBL:KEP69601.1}; TaxID=1185766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava dalianensis.;"
putative branched-chain amino acid ABC transporter, substrate-binding protein
SCNpilot_cont_500_bf_scaffold_310_11
Defluviimonas sp. 20V17, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10287..11060
DNA (774bp) protein (258aa)
Putative branched-chain amino acid ABC transporter ATP-binding subunit protein n=1 Tax=Salinisphaera shabanensis E1L3A RepID=F7Q914_9GAMM rbh
Amino acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:KDB03444.1}; TaxID=1417296 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Defluviimonas.;" source="Defluviimonas sp. 20V17.;"
ABC transporter; K01995 branched-chain amino acid transport system ATP-binding protein
SCNpilot_cont_500_bf_scaffold_310_12
Thioclava sp. 13D2W-2, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11053..11760
DNA (708bp) protein (236aa)
High-affinity branched-chain amino acid transport ATP-binding protein LivF n=1 Tax=Marinobacter sp. BSs20148 RepID=M1F774_9ALTE rbh
High-affinity branched-chain amino acid transport ATP-binding protein LivF {ECO:0000313|EMBL:KFE34645.1}; TaxID=1317124 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava sp. 13D2W-2.;"
livF; high-affinity branched-chain amino acid transport ATP-binding protein LivF rbh
SCNpilot_cont_500_bf_scaffold_310_13
Defluviimonas sp. 20V17, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11833..12738
DNA (906bp) protein (302aa)
Putative branched-chain amino acid transport permease protein n=1 Tax=Salinisphaera shabanensis E1L3A RepID=F7Q917_9GAMM
ABC transporter permease {ECO:0000313|EMBL:KDB03446.1}; TaxID=1417296 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Defluviimonas.;" source="Defluviimonas sp. 20V17.;"
braD; high-affinity branched-chain amino acid transport system permease BraD rbh
SCNpilot_cont_500_bf_scaffold_310_14
Thioclava sp. 13D2W-2, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12738..13706
DNA (969bp) protein (323aa)
Inner-membrane translocator protein n=1 Tax=Salinisphaera shabanensis E1L3A RepID=F7Q918_9GAMM rbh
High-affinity branched-chain amino acid transport system permease livM {ECO:0000313|EMBL:KFE34647.1}; TaxID=1317124 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava sp. 13D2W-2.;"
livM; high-affinity branched-chain amino acid transport system permease livM rbh
SCNpilot_cont_500_bf_scaffold_310_15
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13722..14168)
DNA (447bp) protein (149aa)
GCN5-related N-acetyltransferase n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F382_9RHIZ
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:CCV10930.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
GCN5-like N-acetyltransferase
SCNpilot_cont_500_bf_scaffold_310_16
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14297..15025
DNA (729bp) protein (243aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HXX3_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK54449.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_310_17
Hyphomonas johnsonii, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15033..15482)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Marinobacter sp. BSs20148 RepID=M1FJV3_9ALTE
Uncharacterized protein {ECO:0000313|EMBL:KCZ92986.1}; TaxID=1280950 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas johnsonii MHS-2.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_310_18
Ahrensia sp. R2A130, Ahrensia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15479..16624)
DNA (1146bp) protein (382aa)
Twin-arginine translocation pathway signal n=1 Tax=Ahrensia sp. R2A130 RepID=E0MNY2_9RHOB
Twin-arginine translocation pathway signal {ECO:0000313|EMBL:EFL89163.1}; TaxID=744979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ahrensia.;" source="Ahrensia sp. R2A130.;"
twin-arginine translocation pathway signal
SCNpilot_cont_500_bf_scaffold_310_19
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16836..17570
DNA (735bp) protein (245aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
16S ribosomal RNA methyltransferase RsmE; K09761 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HXX1_9RHIZ
SCNpilot_cont_500_bf_scaffold_310_20
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17703..19076
DNA (1374bp) protein (458aa)
glutamate/cysteine ligase (EC:6.3.2.2); K01919 glutamate--cysteine ligase [EC:6.3.2.2]
Glutamate/cysteine ligase {ECO:0000313|EMBL:AEH87159.1}; EC=6.3.2.2 {ECO:0000313|EMBL:AEH87159.1};; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
Glutamate/cysteine ligase n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y243_MESOW
SCNpilot_cont_500_bf_scaffold_310_21
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19089..19787)
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YVI2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFG70451.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_310_22
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19987..20820)
DNA (834bp) protein (278aa)
sugar ABC transporter permease n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI00035D79F8
ycjP3; inner membrane ABC transporter permease YcjP
Inner membrane ABC transporter permease protein YcjP {ECO:0000313|EMBL:AFL50758.1}; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;"
SCNpilot_cont_500_bf_scaffold_310_23
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20817..21773)
DNA (957bp) protein (319aa)
sugar ABC transporter permease n=1 Tax=Rhizobium giardinii RepID=UPI00035C5843
Trehalose/maltose ABC transporter, permease protein {ECO:0000313|EMBL:AHK46344.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
binding-protein-dependent transport system inner membrane protein; K10237 trehalose/maltose transport system permease protein
SCNpilot_cont_500_bf_scaffold_310_24
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21774..23036)
DNA (1263bp) protein (421aa)
UPI0003D02AEA related cluster n=1 Tax=unknown RepID=UPI0003D02AEA
family 1 extracellular solute-binding protein
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ESZ28836.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
SCNpilot_cont_500_bf_scaffold_310_25
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23179..24039
DNA (861bp) protein (287aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003616757
Putative uncharacterized protein {ECO:0000313|EMBL:EHK54444.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_310_26
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24753..25031)
DNA (279bp) protein (93aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HXW6_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK54442.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_310_27
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25207..26163
DNA (957bp) protein (319aa)
LysR family transcriptional regulator n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HXW5_9RHIZ rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:EHK54441.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
transcriptional regulator
SCNpilot_cont_500_bf_scaffold_310_28
Aurantimonas manganoxydans, Aurantimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26321..27931
DNA (1611bp) protein (537aa)
Putative adenylate/guanylate cyclase n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YME6_MOBAS rbh
Putative adenylate/guanylate cyclase {ECO:0000313|EMBL:EAS51435.1}; TaxID=287752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aurantimonas.;" source="Manganese-oxidizing bacterium (strain SI85-9A1).;"
adenylate cyclase
SCNpilot_cont_500_bf_scaffold_310_29
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27928..29517
DNA (1590bp) protein (530aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
xseA; exodeoxyribonuclease VII large subunit (EC:3.1.11.6); K03601 exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
Exodeoxyribonuclease 7 large subunit n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MIS1_9RHIZ rbh
SCNpilot_cont_500_bf_scaffold_310_30
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29639..30031
DNA (393bp) protein (131aa)
UPI0003CEC9D8 related cluster n=1 Tax=unknown RepID=UPI0003CEC9D8
Uncharacterized protein {ECO:0000313|EMBL:ESY70254.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
hypothetical protein
Displaying items 1-30 of 377 in total

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