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SCNpilot_cont_500_bf_scaffold_407

Search features with annotation key words

Displaying items 1-30 of 331 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_407_1
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..704
DNA (702bp) protein (234aa)
PREDICTED: chaperonin CPN60-like 1, mitochondrial-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C1B275
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
groEL; molecular chaperone GroEL; K04077 chaperonin GroEL
SCNpilot_cont_500_bf_scaffold_407_2
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(759..1451)
DNA (693bp) protein (231aa)
Methyltransferase small n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YGH0_MESOW
methyltransferase small
Methyltransferase small {ECO:0000313|EMBL:AEH84616.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_cont_500_bf_scaffold_407_3
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1562..1747
DNA (186bp) protein (62aa)
CsbD family protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y3S3_MESOW
Uncharacterized protein {ECO:0000313|EMBL:EZQ15071.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
CsbD family protein
SCNpilot_cont_500_bf_scaffold_407_4
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1900..3177)
DNA (1278bp) protein (426aa)
Uncharacterized protein n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UDX1_METS4 rbh
DNA-binding protein {ECO:0000313|EMBL:KFG66538.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
hypothetical protein; K03699 putative hemolysin rbh
SCNpilot_cont_500_bf_scaffold_407_5
Mesorhizobium sp. LSHC412B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3368..4249
DNA (882bp) protein (294aa)
UPI0003CECFA8 related cluster n=1 Tax=unknown RepID=UPI0003CECFA8 rbh
Cation ABC transporter substrate-binding protein {ECO:0000313|EMBL:ESX85029.1}; TaxID=1287285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC412B00.;"
heavy metal ABC transporter substrate binding protein; K02077 zinc/manganese transport system substrate-binding protein
SCNpilot_cont_500_bf_scaffold_407_6
Mesorhizobium sp. LSJC264A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4246..5040
DNA (795bp) protein (265aa)
ABC transporter ATP-binding protein n=1 Tax=Mesorhizobium sp. LSJC264A00 RepID=V7ESP1_9RHIZ rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:ESX12957.1}; TaxID=1287321 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC264A00.;"
ABC transporter family protein rbh
SCNpilot_cont_500_bf_scaffold_407_7
Mesorhizobium sp. LNJC386A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5024..5824
DNA (801bp) protein (267aa)
UPI0003CDDEB7 related cluster n=1 Tax=unknown RepID=UPI0003CDDEB7 rbh
ABC transporter permease {ECO:0000313|EMBL:ESY28813.1}; TaxID=1287270 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC386A00.;"
znuB; cation ABC transporter permease rbh
SCNpilot_cont_500_bf_scaffold_407_8
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5832..6296
DNA (465bp) protein (155aa)
Fe2+/Zn2+ uptake regulation protein n=1 Tax=Phyllobacterium sp. YR531 RepID=J3CF84_9RHIZ
Fe2+/Zn2+ uptake regulation protein {ECO:0000313|EMBL:EJN04544.1}; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;"
zur; transcriptional regulator, FUR family; K09823 Fur family transcriptional regulator, zinc uptake regulator
SCNpilot_cont_500_bf_scaffold_407_9
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6346..7602
DNA (1257bp) protein (419aa)
aminopeptidase II; K01269 aminopeptidase [EC:3.4.11.-]
peptidase M29 n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003621336 rbh
Aminopeptidase {ECO:0000313|EMBL:KFC70967.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_cont_500_bf_scaffold_407_10
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7763..8500
DNA (738bp) protein (246aa)
Crp/Fnr family transcriptional regulator n=1 Tax=Rhizobium leguminosarum RepID=UPI00037FEB9C
Crp/Fnr family transcriptional regulator {ECO:0000313|EMBL:KFG68094.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
Crp/Fnr family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_407_11
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8634..10025
DNA (1392bp) protein (464aa)
fumC; fumarate hydratase; K01679 fumarate hydratase, class II [EC:4.2.1.2] rbh
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743, ECO:0000313|EMBL:ABG61759.1};; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
Fumarate hydratase class II n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11LG6_MESSB rbh
SCNpilot_cont_500_bf_scaffold_407_12
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10150..10533
DNA (384bp) protein (128aa)
Putative quinol oxidase subunit n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F947_9RHIZ
Putative quinol oxidase subunit {ECO:0000313|EMBL:CCV13005.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
hypothetical protein; K15977 putative oxidoreductase
SCNpilot_cont_500_bf_scaffold_407_13
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10749..11444)
DNA (696bp) protein (232aa)
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01018, ECO:0000256|SAAS:SAAS00008790}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_01018};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_01018};; EC=2.4.2.17 {ECO:0000256|HAMAP-Rule:MF_01018, ECO:0000256|SAAS:SAAS00046302};; TaxID=935547 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium loti R7A.;"
hisG; ATP phosphoribosyltransferase (EC:2.4.2.17); K00765 ATP phosphoribosyltransferase [EC:2.4.2.17]
ATP phosphoribosyltransferase n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=HIS1_RHILO
SCNpilot_cont_500_bf_scaffold_407_14
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11665..12339)
DNA (675bp) protein (225aa)
ATP phosphoribosyltransferase regulatory subunit n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EW65_9RHIZ
ATP phosphoribosyltransferase regulatory subunit {ECO:0000256|HAMAP-Rule:MF_00125, ECO:0000256|SAAS:SAAS00089029}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
tRNA synthetase class II (G H P and S); K02502 ATP phosphoribosyltransferase regulatory subunit
SCNpilot_cont_500_bf_scaffold_407_15
Agrobacterium rubi, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12706..13071)
DNA (366bp) protein (122aa)
Putative ring-cleavage extradiol dioxygenase n=1 Tax=Caulobacter sp. AP07 RepID=J2PX49_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:GAK70143.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_407_16
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(13072..14661)
DNA (1590bp) protein (530aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
Histidyl-tRNA synthetase n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KKH2_MESAW rbh
histidyl-tRNA synthetase rbh
SCNpilot_cont_500_bf_scaffold_407_17
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14930..15568)
DNA (639bp) protein (213aa)
3-methyladenine DNA glycosylase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002F615FD
3-methyladenine DNA glycosylase {ECO:0000313|EMBL:EXL03710.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
DNA-3-methyladenine glycosylase 1
SCNpilot_cont_500_bf_scaffold_407_18
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15828..16622
DNA (795bp) protein (265aa)
ErfK/YbiS/YcfS/YnhG n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11LG1_MESSB rbh
ErfK/YbiS/YcfS/YnhG rbh
ErfK/YbiS/YcfS/YnhG {ECO:0000313|EMBL:ABG61764.1}; Flags: Precursor;; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCNpilot_cont_500_bf_scaffold_407_19
unknown

Not on your lists

comp(16687..16842)
DNA (156bp) protein (52aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_407_20
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17010..17942
DNA (933bp) protein (311aa)
methylenetetrahydrofolate dehydrogenase (EC:1.5.1.5); K01491 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
Bifunctional protein FolD n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TNB2_MESCW
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_cont_500_bf_scaffold_407_21

Not on your lists

17993..18286
DNA (294bp) protein (98aa)
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI0003686068
Uncharacterized protein {ECO:0000313|EMBL:KKN79407.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_407_22

Not on your lists

18279..18641
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00037EB9AD
Uncharacterized protein {ECO:0000313|EMBL:KKN79406.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_407_23
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18659..20011)
DNA (1353bp) protein (451aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2N0Z2_9RHIZ
Glycolate oxidase iron-sulfur subunit {ECO:0000256|PIRNR:PIRNR000139}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
hypothetical protein; K11473 glycolate oxidase iron-sulfur subunit
SCNpilot_cont_500_bf_scaffold_407_24
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20024..20401)
DNA (378bp) protein (126aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HXY4_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK54407.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_407_25
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20442..21650)
DNA (1209bp) protein (403aa)
FAD linked oxidase domain-containing protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HXY3_9RHIZ
FAD linked oxidase domain-containing protein {ECO:0000313|EMBL:EHK54406.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
FAD linked oxidase; K11472 glycolate oxidase FAD binding subunit rbh
SCNpilot_cont_500_bf_scaffold_407_26
Mesorhizobium sp. LSHC412B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22186..23682)
DNA (1497bp) protein (499aa)
D-lactate dehydrogenase (EC:1.1.2.4); K00104 glycolate oxidase [EC:1.1.3.15]
UPI0003CF372A related cluster n=1 Tax=unknown RepID=UPI0003CF372A rbh
FAD-binding protein {ECO:0000313|EMBL:ESX80959.1}; TaxID=1287285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC412B00.;"
SCNpilot_cont_500_bf_scaffold_407_27
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23870..24643
DNA (774bp) protein (258aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HXX9_9RHIZ rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHK54455.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_407_28
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24770..26224
DNA (1455bp) protein (485aa)
Iron-sulfur cluster binding protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HXX8_9RHIZ
Iron-sulfur cluster binding protein {ECO:0000313|EMBL:EHK54454.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
iron-sulfur cluster binding protein
SCNpilot_cont_500_bf_scaffold_407_29
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26221..26895
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11LF2_MESSB
hypothetical protein; K00782 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG61773.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCNpilot_cont_500_bf_scaffold_407_30
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26904..27659
DNA (756bp) protein (252aa)
metallophosphoesterase; K07313 serine/threonine protein phosphatase 1 [EC:3.1.3.16]
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003725DB5
Metallophosphoesterase {ECO:0000313|EMBL:ADV11663.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
Displaying items 1-30 of 331 in total

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