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SCNpilot_cont_500_bf_scaffold_429

Search features with annotation key words

Displaying items 1-30 of 74 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_429_1
unknown

Not on your lists

1..132
DNA (132bp) protein (44aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_429_2
unknown

Not on your lists

148..273
DNA (126bp) protein (42aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_429_3
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(430..1431)
DNA (1002bp) protein (334aa)
peptidase C45 n=1 Tax=Sinorhizobium medicae RepID=UPI0003720D49 rbh
peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase rbh
Peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase {ECO:0000313|EMBL:ABR62684.1}; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;"
SCNpilot_cont_500_bf_scaffold_429_4
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1626..2609)
DNA (984bp) protein (328aa)
putative 2-nitropropane dioxygenase-like dioxygenase; K00459 nitronate monooxygenase [EC:1.13.12.16]
2-nitropropane dioxygenase n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MS13_9RHIZ rbh
2-nitropropane dioxygenase {ECO:0000313|EMBL:EKF20112.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
SCNpilot_cont_500_bf_scaffold_429_5
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2773..3882
DNA (1110bp) protein (370aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036D8B65
Uncharacterized protein {ECO:0000313|EMBL:ESW85615.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_429_6
Acetobacter malorum, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3896..4972)
DNA (1077bp) protein (359aa)
Adenosine deaminase {ECO:0000313|EMBL:KFL92013.1}; EC=3.5.4.4 {ECO:0000313|EMBL:KFL92013.1};; TaxID=178901 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter.;" source="Acetobacter malorum.;"
adenosine deaminase; K01488 adenosine deaminase [EC:3.5.4.4]
adenosine deaminase n=1 Tax=Gluconacetobacter europaeus RepID=UPI00037D1AFA rbh
SCNpilot_cont_500_bf_scaffold_429_7
Amycolatopsis japonica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4983..6410)
DNA (1428bp) protein (476aa)
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI00036CD9D3
Conserved putative membrane protein {ECO:0000313|EMBL:AIG76051.1}; TaxID=208439 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis japonica.;"
SSS family transporter
SCNpilot_cont_500_bf_scaffold_429_8
unknown

Not on your lists

comp(6407..6661)
DNA (255bp) protein (85aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_429_9
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6658..7281)
DNA (624bp) protein (208aa)
Transcriptional regulatory protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89H52_BRADU
Transcriptional regulator {ECO:0000313|EMBL:KJC34116.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
transcriptional regulator
SCNpilot_cont_500_bf_scaffold_429_10
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7570..9744
DNA (2175bp) protein (725aa)
Penicillin-binding protein, 1A family n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y5I7_MESOW
Penicillin-binding protein, 1A family {ECO:0000313|EMBL:CDX32671.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
penicillin-binding protein
SCNpilot_cont_500_bf_scaffold_429_11
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9825..10574
DNA (750bp) protein (250aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Nitratireductor indicus C115 RepID=K2N9P5_9RHIZ rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EKF44293.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
SCNpilot_cont_500_bf_scaffold_429_12
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10717..11727)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3JAN6_FRASU
hypothetical protein; K02051 NitT/TauT family transport system substrate-binding protein
Uncharacterized protein {ECO:0000313|EMBL:ADP82228.1}; Flags: Precursor;; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
SCNpilot_cont_500_bf_scaffold_429_13
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11742..12563)
DNA (822bp) protein (274aa)
hypothetical protein n=1 Tax=Actinomadura flavalba RepID=UPI0003737A68
binding-protein-dependent transport system inner membrane protein; K02050 NitT/TauT family transport system permease protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADP82226.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
SCNpilot_cont_500_bf_scaffold_429_14
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12560..13393)
DNA (834bp) protein (278aa)
ABC transporter related protein n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3JAN5_FRASU rbh
ABC transporter; K02049 NitT/TauT family transport system ATP-binding protein rbh
ABC transporter related protein {ECO:0000313|EMBL:ADP82227.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
SCNpilot_cont_500_bf_scaffold_429_15
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13514..14245
DNA (732bp) protein (244aa)
Transcriptional regulator, GntR family n=1 Tax=Variovorax paradoxus B4 RepID=T1XKV0_VARPD
transcriptional regulator, GntR family
Transcriptional regulator, GntR family {ECO:0000313|EMBL:AGU52934.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
SCNpilot_cont_500_bf_scaffold_429_16
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14269..15513
DNA (1245bp) protein (415aa)
sphingosine-1-phosphate lyase; K01634 sphinganine-1-phosphate aldolase [EC:4.1.2.27]
Putative sphingosine-1-phosphate lyase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RF80_PHEZH
Uncharacterized protein {ECO:0000313|EMBL:KGF69049.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
SCNpilot_cont_500_bf_scaffold_429_17
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15544..16104)
DNA (561bp) protein (187aa)
Transcriptional regulator, LuxR family/sensory box protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3V9N6_9RHOB
Transcriptional regulator, LuxR family/sensory box protein {ECO:0000313|EMBL:EAQ14627.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" source="Maritimibacter alkaliphilus HTCC2654.;"
LuxR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_429_18
Hoeflea sp. IMCC20628, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16245..17771
DNA (1527bp) protein (509aa)
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II {ECO:0000313|EMBL:AKI00014.1}; EC=6.2.1.3 {ECO:0000313|EMBL:AKI00014.1};; TaxID=1620421 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. IMCC20628.;"
long-chain-fatty-acid CoA ligase (EC:6.2.1.3); K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3]
Uncharacterized protein n=2 Tax=Labrenzia RepID=U7G7Y0_9RHOB
SCNpilot_cont_500_bf_scaffold_429_19
Thioclava sp. DT23-4, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17990..19192
DNA (1203bp) protein (401aa)
ABC transporter permease n=1 Tax=Oceanicola sp. S124 RepID=UPI0002557982
Uncharacterized protein {ECO:0000313|EMBL:KEO53196.1}; TaxID=1353528 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava sp. DT23-4.;"
Benzoate transport, extracellular ligand-binding receptor
SCNpilot_cont_500_bf_scaffold_429_20
Sulfitobacter mediterraneus, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19249..20019
DNA (771bp) protein (257aa)
h16_A2256; ABC transporter ATPase (EC:3.6.3.22); K01995 branched-chain amino acid transport system ATP-binding protein
ABC transporter related protein n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9DUE5_9RHOB rbh
Branched-chain amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:KAJ02527.1}; TaxID=83219 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter mediterraneus.;"
SCNpilot_cont_500_bf_scaffold_429_21
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20016..20738
DNA (723bp) protein (241aa)
ABC transporter related protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3V9N9_9RHOB rbh
ABC transporter related protein {ECO:0000313|EMBL:EAQ14630.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" source="Maritimibacter alkaliphilus HTCC2654.;"
ABC transporter ATPase; K01996 branched-chain amino acid transport system ATP-binding protein
SCNpilot_cont_500_bf_scaffold_429_22
Oceanibulbus indolifex, Oceanibulbus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20748..21752
DNA (1005bp) protein (335aa)
ABC transporter permease n=1 Tax=Oceanicola sp. S124 RepID=UPI0002557985
ABC-type transporter, permease component {ECO:0000313|EMBL:EDQ06844.1}; TaxID=391624 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanibulbus.;" source="Oceanibulbus indolifex HEL-45.;"
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein
SCNpilot_cont_500_bf_scaffold_429_23
Oceanibulbus indolifex, Oceanibulbus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21749..22864
DNA (1116bp) protein (372aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9DUD9_9RHOB
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:EDQ06843.1}; TaxID=391624 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanibulbus.;" source="Oceanibulbus indolifex HEL-45.;"
putative amino acid or sugar ABC transport system, permease protein
SCNpilot_cont_500_bf_scaffold_429_24
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22861..23697
DNA (837bp) protein (279aa)
Alpha/beta hydrolase n=1 Tax=Achromobacter piechaudii HLE RepID=J4YC11_9BURK
Alpha/beta hydrolase {ECO:0000313|EMBL:EJO28636.1}; TaxID=1156919 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter piechaudii HLE.;"
putative hydrolase
SCNpilot_cont_500_bf_scaffold_429_25
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23710..24159)
DNA (450bp) protein (150aa)
Protein required for attachment to host cells-like protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MBI3_9RHIZ
Protein required for attachment to host cells-like protein {ECO:0000313|EMBL:EKF19511.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
protein required for attachment to host cells-like
SCNpilot_cont_500_bf_scaffold_429_26
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24405..25847
DNA (1443bp) protein (481aa)
uroporphyrinogen-III C-methyltransferase; K02302 uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4] rbh
Uroporphyrinogen-III C-methyltransferase {ECO:0000313|EMBL:ABG65356.1}; EC=2.1.1.107 {ECO:0000313|EMBL:ABG65356.1};; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
Uroporphyrinogen-III C-methyltransferase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11B69_MESSB rbh
SCNpilot_cont_500_bf_scaffold_429_27
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25844..26152
DNA (309bp) protein (103aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HJ11_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK59306.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_429_28
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26195..27865
DNA (1671bp) protein (557aa)
nitrite and sulfite reductase 4Fe-4S region; K00381 sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
Nitrite and sulfite reductase 4Fe-4S region n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HJ10_9RHIZ
Nitrite and sulfite reductase 4Fe-4S region {ECO:0000313|EMBL:EHK59305.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
SCNpilot_cont_500_bf_scaffold_429_29
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27840..28586
DNA (747bp) protein (249aa)
phosphoadenosine phosphosulfate reductase; K00390 phosphoadenosine phosphosulfate reductase [EC:1.8.4.8]
Phosphoadenosine phosphosulfate reductase {ECO:0000255|HAMAP-Rule:MF_00063}; EC=1.8.4.8 {ECO:0000255|HAMAP-Rule:MF_00063};; 3'-phosphoadenylylsulfate reductase {ECO:0000255|HAMAP-Rule:MF_00063}; PAPS reductase, thioredoxin dependent {ECO:0000255|HAMAP-Rule:MF_00063}; PAPS sulfotransferase {ECO:0000255|HAMAP-Rule:MF_00063}; PAdoPS reductase {ECO:0000255|HAMAP-Rule:MF_00063}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativ
Phosphoadenosine phosphosulfate reductase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=CYSH_MESSB
SCNpilot_cont_500_bf_scaffold_429_30
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28608..29213
DNA (606bp) protein (202aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HJ08_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK59303.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
Displaying items 1-30 of 74 in total

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