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SCNpilot_cont_500_bf_scaffold_446

Search features with annotation key words

Displaying items 1-30 of 122 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_446_1
Sphingobium quisquiliarum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..1510)
DNA (1509bp) protein (503aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036994AA
Plasmid partitioning protein ParB {ECO:0000313|EMBL:EQA98175.1}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium quisquiliarum P25.;"
ParB domain-containing protein nuclease; K03497 chromosome partitioning protein, ParB family
SCNpilot_cont_500_bf_scaffold_446_2
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1683..2057)
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00036C0966
Uncharacterized protein {ECO:0000313|EMBL:KIZ35736.1}; Flags: Fragment;; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_446_3
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2023..2808)
DNA (786bp) protein (262aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00036C0966
Uncharacterized protein {ECO:0000313|EMBL:CEG10590.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_446_4
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2930..3343)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KJN6_MESAW
Membrane protein {ECO:0000313|EMBL:KKC31167.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_446_5
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3474..3848)
DNA (375bp) protein (125aa)
ChrB domain-containing protein n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RCA8_DESPD
ChrB domain-containing protein
ChrB domain-containing protein {ECO:0000313|EMBL:ADW17836.1}; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3).;"
SCNpilot_cont_500_bf_scaffold_446_6
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4080..4310
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0SV79_CAUSK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABZ72969.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_cont_500_bf_scaffold_446_7
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4381..4578
DNA (198bp) protein (66aa)
DNA repair protein RadC n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IJK2_XANP2
DNA repair protein RadC
DNA repair protein RadC {ECO:0000313|EMBL:ABS68195.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCNpilot_cont_500_bf_scaffold_446_8
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4940..6421)
DNA (1482bp) protein (494aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
Trigger factor n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KQ52_MESAW rbh
trigger factor rbh
SCNpilot_cont_500_bf_scaffold_446_9
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7085..7348
DNA (264bp) protein (88aa)
UPI0003D01CA8 related cluster n=1 Tax=unknown RepID=UPI0003D01CA8
Uncharacterized protein {ECO:0000313|EMBL:ESZ22255.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
SCNpilot_cont_500_bf_scaffold_446_10
Octadecabacter antarcticus, Octadecabacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7463..8332
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Octadecabacter antarcticus 307 RepID=M9R460_9RHOB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGI66987.1}; TaxID=391626 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Octadecabacter.;" source="Octadecabacter antarcticus 307.;"
SCNpilot_cont_500_bf_scaffold_446_11
unknown

Not on your lists

8322..8504
DNA (183bp) protein (61aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_446_12
Martelella endophytica, Martelella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8576..8929)
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003613909
Uncharacterized protein {ECO:0000313|EMBL:AJY44655.1}; TaxID=1486262 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Martelella.;" source="Martelella endophytica.;"
SCNpilot_cont_500_bf_scaffold_446_13
unknown

Not on your lists

comp(8963..9082)
DNA (120bp) protein (40aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_446_14
unknown

Not on your lists

comp(9275..9643)
DNA (369bp) protein (123aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_446_15
Ralstonia phage RSL1, Caudovirales, Viruses

Not on your lists

comp(9637..10155)
DNA (519bp) protein (173aa)
Putative uncharacterized protein n=1 Tax=Ralstonia phage RSL1 RepID=B2ZY33_9CAUD
Putative uncharacterized protein {ECO:0000313|EMBL:BAG41609.1}; TaxID=482058 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Ralstonia phage RSL1.;"
SCNpilot_cont_500_bf_scaffold_446_16
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10158..10751)
DNA (594bp) protein (198aa)
Lysozyme {ECO:0000256|RuleBase:RU003788}; EC=3.2.1.17 {ECO:0000256|RuleBase:RU003788};; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;"
UPI0003CE5CDD related cluster n=1 Tax=unknown RepID=UPI0003CE5CDD
phage related lysozyme protein
SCNpilot_cont_500_bf_scaffold_446_17
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10741..11025)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2P9W3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF43961.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_446_18
unknown

Not on your lists

11041..11331
DNA (291bp) protein (97aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_446_19
unknown

Not on your lists

comp(11526..12119)
DNA (594bp) protein (198aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_446_20
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12140..15427)
DNA (3288bp) protein (1096aa)
UPI0003CF12CF related cluster n=1 Tax=unknown RepID=UPI0003CF12CF
Uncharacterized protein {ECO:0000313|EMBL:ESW89030.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
cell wall surface anchor family protein
SCNpilot_cont_500_bf_scaffold_446_21
unknown

Not on your lists

comp(15493..16206)
DNA (714bp) protein (238aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_446_22
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16203..17753)
DNA (1551bp) protein (517aa)
Cell wall surface anchor family protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7QC39_9DELT
Cell wall surface anchor family protein {ECO:0000313|EMBL:EHJ49485.1}; TaxID=644968 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. FW1012B.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_446_23
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17786..18070)
DNA (285bp) protein (95aa)
hypothetical protein n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI00035E8131
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG64143.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCNpilot_cont_500_bf_scaffold_446_24
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18088..20211)
DNA (2124bp) protein (708aa)
Could be an antifreeze protein n=1 Tax=Nitratireductor indicus C115 RepID=K2PG02_9RHIZ
Could be an antifreeze protein {ECO:0000313|EMBL:EKF39957.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
could be an antifreeze protein
SCNpilot_cont_500_bf_scaffold_446_25
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20208..20606)
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Ahrensia kielensis RepID=UPI00035D09B4
Putative uncharacterized protein {ECO:0000313|EMBL:EHK56812.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
SCNpilot_cont_500_bf_scaffold_446_26
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20603..21172)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2NKJ9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF39955.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_446_27
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21223..21612
DNA (390bp) protein (130aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HR19_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK56799.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
SCNpilot_cont_500_bf_scaffold_446_28
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21597..22307)
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2NQ15_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF39954.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_446_29
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22307..24841)
DNA (2535bp) protein (845aa)
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00035E2486
Uncharacterized protein {ECO:0000313|EMBL:EXL06539.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
tail tape measure protein
SCNpilot_cont_500_bf_scaffold_446_30
unknown

Not on your lists

24906..25295
DNA (390bp) protein (130aa)

This feature has no annotations

Displaying items 1-30 of 122 in total

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