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SCNpilot_cont_500_bf_scaffold_455

Search features with annotation key words

Displaying items 1-30 of 123 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_455_1
Methylobacterium mesophilicum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(397..1191)
DNA (795bp) protein (265aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI0003618218
Uncharacterized protein {ECO:0000313|EMBL:EMS39732.1}; TaxID=908290 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium mesophilicum SR1.6/6.;"
IclR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_455_2
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1351..2253
DNA (903bp) protein (301aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI000362ED92 rbh
Probable antibiotic-resistance protein {ECO:0000313|EMBL:EDP66604.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
Putative antibiotic-resistance protein
SCNpilot_cont_500_bf_scaffold_455_3
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

2263..3231
DNA (969bp) protein (323aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI0003773296 rbh
dppB3; Dipeptide ABC transporter, permease component; K02033 peptide/nickel transport system permease protein
Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
SCNpilot_cont_500_bf_scaffold_455_4
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3246..4142
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00036E1708
Putative dipeptide ABC transporter, permease protein DppC {ECO:0000313|EMBL:EHM02423.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
oligopeptide transport permease APPC; K02034 peptide/nickel transport system permease protein
SCNpilot_cont_500_bf_scaffold_455_5
Mycobacterium phlei, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4139..5011
DNA (873bp) protein (291aa)
Oligopeptide transport ATP-binding protein OppD n=1 Tax=Mycobacterium phlei RIVM601174 RepID=I0RYQ6_MYCPH
Oligopeptide transport ATP-binding protein OppD {ECO:0000313|EMBL:EID16259.1}; TaxID=1150599 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium phlei RIVM601174.;"
oligopeptide/dipeptide ABC transporter ATP-binding protein
SCNpilot_cont_500_bf_scaffold_455_6
Streptomyces sp. JS01, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5008..5967
DNA (960bp) protein (320aa)
hypothetical protein n=1 Tax=Streptomyces sp. CNT302 RepID=UPI00036546A2
Peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:KFK90992.1}; TaxID=1525753 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. JS01.;"
appF; oligopeptide ABC transporter ATP-binding protein; K02032 peptide/nickel transport system ATP-binding protein
SCNpilot_cont_500_bf_scaffold_455_7
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5968..7644
DNA (1677bp) protein (559aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00035E1D5D rbh
extracellular solute-binding protein
Extracellular solute-binding protein family 5 {ECO:0000313|EMBL:ABS68000.1}; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCNpilot_cont_500_bf_scaffold_455_8
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7717..9942
DNA (2226bp) protein (742aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00036ED474 rbh
Putative pimeloyl-CoA synthetase {ECO:0000313|EMBL:EDP66605.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
CoA-binding domain-containing protein
SCNpilot_cont_500_bf_scaffold_455_9
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10215..12326
DNA (2112bp) protein (704aa)
Catalase {ECO:0000256|RuleBase:RU000498}; EC=1.11.1.6 {ECO:0000256|RuleBase:RU000498};; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
catalase (EC:1.11.1.6); K03781 catalase [EC:1.11.1.6] rbh
UPI0003CFDDEB related cluster n=1 Tax=unknown RepID=UPI0003CFDDEB rbh
SCNpilot_cont_500_bf_scaffold_455_10
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12412..13665)
DNA (1254bp) protein (418aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NSD3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EJZ29730.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_455_11
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13919..14515)
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A3X3_STAND
Uncharacterized protein {ECO:0000313|EMBL:EJZ29733.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_455_12
Burkholderia sp. YI23, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14531..16612)
DNA (2082bp) protein (694aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. YI23 RepID=G8MK67_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AET93570.1}; TaxID=1097668 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. YI23.;"
SCNpilot_cont_500_bf_scaffold_455_13
Streptomyces viridochromogenes, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16993..17973
DNA (981bp) protein (327aa)
Putative Citrate carrier protein n=1 Tax=Streptomyces viridochromogenes Tue57 RepID=L8P0Q2_STRVR
Putative Citrate carrier protein {ECO:0000313|EMBL:ELS51136.1}; TaxID=1160705 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces viridochromogenes Tue57.;"
citrate carrier protein
SCNpilot_cont_500_bf_scaffold_455_14
Achromobacter arsenitoxydans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17951..18913)
DNA (963bp) protein (321aa)
Putative nitrogen assimilation regulatory protein nac n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0F543_9BURK rbh
Putative nitrogen assimilation regulatory protein nac {ECO:0000313|EMBL:EHK66622.1}; TaxID=477184 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter arsenitoxydans SY8.;"
lysR; LysR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_455_15
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19060..20025)
DNA (966bp) protein (322aa)
transcriptional regulator n=1 Tax=Rhizobium giardinii RepID=UPI0003783AED
HTH-type transcriptional regulator glxA {ECO:0000313|EMBL:CDM61252.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;"
transcriptional regulator protein, AraC family
SCNpilot_cont_500_bf_scaffold_455_16
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20113..21363
DNA (1251bp) protein (417aa)
sarcosine oxidase subunit beta; K00303 sarcosine oxidase, subunit beta [EC:1.5.3.1]
sarcosine oxidase subunit beta n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI0003610BF7
Sarcosine oxidase, beta subunit family {ECO:0000313|EMBL:ABR62111.1}; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;"
SCNpilot_cont_500_bf_scaffold_455_17
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21373..21660
DNA (288bp) protein (96aa)
soxDe; sarcosine oxidase delta subunit protein; K00304 sarcosine oxidase, subunit delta [EC:1.5.3.1]
Sarcosine oxidase, delta subunit family, heterotetrameric form n=1 Tax=Rhizobium sp. CF142 RepID=J2LDT4_9RHIZ
Sarcosine oxidase, delta subunit family, heterotetrameric form {ECO:0000313|EMBL:EJJ31702.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
SCNpilot_cont_500_bf_scaffold_455_18
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21657..24536
DNA (2880bp) protein (960aa)
soxA; sarcosine oxidase alpha subunit; K00302 sarcosine oxidase, subunit alpha [EC:1.5.3.1]
Sarcosine oxidase alpha subunit {ECO:0000313|EMBL:CCF00801.1}; EC=1.5.3.1 {ECO:0000313|EMBL:CCF00801.1};; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium fredii (strain HH103) (Sinorhizobium fredii).;"
Sarcosine oxidase alpha subunit n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9AIB9_RHIFH
SCNpilot_cont_500_bf_scaffold_455_19
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24529..25080
DNA (552bp) protein (184aa)
soxG1; putative sarcosine oxidase gamma subunit protein; K00305 sarcosine oxidase, subunit gamma [EC:1.5.3.1]
Sarcosine oxidase gamma subunit n=7 Tax=Rhizobium meliloti RepID=F6BR84_SINMB
Putative sarcosine oxidase gamma subunit protein {ECO:0000313|EMBL:AEH80782.1}; TaxID=707241 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti (strain SM11).;"
SCNpilot_cont_500_bf_scaffold_455_20
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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25297..26409
DNA (1113bp) protein (371aa)
Nitrite reductase n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BT08_9RHIZ rbh
Nitrite reductase {ECO:0000313|EMBL:EIM72710.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
nitrite reductase, copper-containing
SCNpilot_cont_500_bf_scaffold_455_21
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26467..27363
DNA (897bp) protein (299aa)
UPI0003CFC76D related cluster n=1 Tax=unknown RepID=UPI0003CFC76D rbh
Uncharacterized protein {ECO:0000313|EMBL:ESZ20079.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_455_22
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27564..28706
DNA (1143bp) protein (381aa)
UPI0003D030D3 related cluster n=1 Tax=unknown RepID=UPI0003D030D3 rbh
NnrS {ECO:0000313|EMBL:ESZ20080.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
NnrS family protein; K07234 uncharacterized protein involved in response to NO rbh
SCNpilot_cont_500_bf_scaffold_455_23
unknown

Not on your lists

comp(28773..28904)
DNA (132bp) protein (44aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_455_24
unknown

Not on your lists

comp(28959..29156)
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_455_25
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29228..29674)
DNA (447bp) protein (149aa)
UPI0003CF9D7D related cluster n=1 Tax=unknown RepID=UPI0003CF9D7D
Pseudoazurin {ECO:0000313|EMBL:ESZ20087.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
pseudoazurin
SCNpilot_cont_500_bf_scaffold_455_26
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29960..30415
DNA (456bp) protein (152aa)
BadM/Rrf2 family transcriptional regulator n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HZ35_9RHIZ
BadM/Rrf2 family transcriptional regulator {ECO:0000313|EMBL:EHK53989.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein; K13771 Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
SCNpilot_cont_500_bf_scaffold_455_27
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30446..32098
DNA (1653bp) protein (551aa)
fixN3; FixN3 cytochrome c oxidase subunit 1 (EC:1.9.3.1) rbh
peptidase S41 n=1 Tax=Rhizobium loti RepID=UPI00037901E9 rbh
Cbb3-type cytochrome c oxidase subunit I {ECO:0000313|EMBL:EHK53990.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
SCNpilot_cont_500_bf_scaffold_455_28
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32105..32857
DNA (753bp) protein (251aa)
peptidase S41 n=1 Tax=Rhizobium loti RepID=UPI00036B1FED rbh
cbb3-type cytochrome c oxidase subunit II; K00405 cytochrome c oxidase cbb3-type subunit II rbh
Cytochrome c oxidase, cbb3-type, subunit II {ECO:0000313|EMBL:ABR64617.1}; Flags: Precursor;; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;"
SCNpilot_cont_500_bf_scaffold_455_29
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32867..33031
DNA (165bp) protein (55aa)
Cbb3-type cytochrome oxidase component n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HZ38_9RHIZ
Nitrogen fixation protein FixQ {ECO:0000313|EMBL:EZQ13045.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
fixq3; cb-type cytochrome c oxidase subunit IV; K00407 cytochrome c oxidase cbb3-type subunit IV
SCNpilot_cont_500_bf_scaffold_455_30
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33028..33909
DNA (882bp) protein (294aa)
cytochrome CBB3 n=1 Tax=Rhizobium loti RepID=UPI000382653D rbh
cytochrome c oxidase, cbb3-type, subunit III rbh
Cbb3-type cytochrome c oxidase subunit {ECO:0000256|PIRNR:PIRNR000006}; TaxID=1401243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti RU11/001.;"
Displaying items 1-30 of 123 in total

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