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SCNpilot_cont_500_bf_scaffold_631

Search features with annotation key words

Displaying items 1-30 of 72 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_631_1
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..467
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KPY4_MESAW
Uncharacterized protein {ECO:0000313|EMBL:CDX44562.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_631_2
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

471..1946
DNA (1476bp) protein (492aa)
TonB family protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HST0_9RHIZ
TonB family protein {ECO:0000313|EMBL:EHK56217.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
TonB family protein; K03832 periplasmic protein TonB
SCNpilot_cont_500_bf_scaffold_631_3
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2269..3216)
DNA (948bp) protein (316aa)
ABC-type sugar transport system, periplasmic component n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2012 RepID=J0CF37_RHILT
ABC-type sugar transport system, periplasmic component {ECO:0000313|EMBL:EJC77885.1}; Flags: Precursor;; TaxID=754522 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2012.;"
solute-binding component of ABC transporter; K10439 ribose transport system substrate-binding protein
SCNpilot_cont_500_bf_scaffold_631_4
Rhizobium sp. H41, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3312..4319)
DNA (1008bp) protein (336aa)
Ribose ABC transporter membrane spanning protein n=2 Tax=Rhizobium RepID=K5CV93_RHILU
putative ribose/xylose/arabinose/galactoside ABC transporter, permease component
ABC transporter permease {ECO:0000313|EMBL:KGE80704.1}; TaxID=1510041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. H41.;"
SCNpilot_cont_500_bf_scaffold_631_5
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4316..4612)
DNA (297bp) protein (99aa)
ribose ABC transporter ATPase; K10441 ribose transport system ATP-binding protein [EC:3.6.3.17]
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037B9B67
Putative ABC transporter, ATP binding subunit ( high-affinity D-ribose transport) {ECO:0000313|EMBL:CDN55458.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
SCNpilot_cont_500_bf_scaffold_631_6
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4609..5766)
DNA (1158bp) protein (386aa)
ABC transporter; K10441 ribose transport system ATP-binding protein [EC:3.6.3.17]
ABC-type sugar transport system, ATPase component n=1 Tax=Rhizobium sp. CF080 RepID=J3BBU6_9RHIZ
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGD99677.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
SCNpilot_cont_500_bf_scaffold_631_7
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6164..7090
DNA (927bp) protein (309aa)
ABC transporter-like protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HQF5_9RHIZ rbh
ABC transporter-like protein {ECO:0000313|EMBL:EHK57040.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
ABC transporter ATP-binding protein; K09687 antibiotic transport system ATP-binding protein rbh
SCNpilot_cont_500_bf_scaffold_631_8
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7087..7848
DNA (762bp) protein (254aa)
ABC transporter permease protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HQF6_9RHIZ rbh
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
ABC transporter permease; K01992 ABC-2 type transport system permease protein rbh
SCNpilot_cont_500_bf_scaffold_631_9
Mesorhizobium sp. LSJC277A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8091..9479
DNA (1389bp) protein (463aa)
pyridoxal-5'-phosphate-dependent protein subunit beta; K01697 cystathionine beta-synthase [EC:4.2.1.22]
UPI0003CED158 related cluster n=1 Tax=unknown RepID=UPI0003CED158
Cystathionine beta-synthase {ECO:0000313|EMBL:ESW73147.1}; TaxID=1287334 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC277A00.;"
SCNpilot_cont_500_bf_scaffold_631_10
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9476..10645
DNA (1170bp) protein (390aa)
Cystathionine gamma-synthase, PLP-dependent {ECO:0000313|EMBL:CDX13705.1}; EC=2.5.1.48 {ECO:0000313|EMBL:CDX13705.1};; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
cystathionine beta-lyase n=1 Tax=Hoeflea sp. 108 RepID=UPI00037C8529
cystathionine beta-lyase/cystathionine gamma-synthase
SCNpilot_cont_500_bf_scaffold_631_11
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10860..11708)
DNA (849bp) protein (283aa)
Short-chain dehydrogenase/reductase SDR n=2 Tax=Acidiphilium RepID=A5G0D2_ACICJ
hypothetical protein
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABQ31314.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
SCNpilot_cont_500_bf_scaffold_631_12
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11839..12627
DNA (789bp) protein (263aa)
3-oxoadipate enol-lactonase; K01055 3-oxoadipate enol-lactonase [EC:3.1.1.24]
3-oxoadipate enol-lactonase n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MK55_9RHIZ
3-oxoadipate enol-lactonase {ECO:0000313|EMBL:EKF17602.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
SCNpilot_cont_500_bf_scaffold_631_13
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12866..14959
DNA (2094bp) protein (698aa)
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein; K07516 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00031AD367
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein {ECO:0000313|EMBL:EHK56342.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
SCNpilot_cont_500_bf_scaffold_631_14
bacterium YEK0313, Bacteria

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14956..16641
DNA (1686bp) protein (562aa)
AMP-dependent synthetase n=1 Tax=Afipia birgiae RepID=UPI000317235B
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:CEJ12833.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
long-chain-fatty-acid--CoA ligase
SCNpilot_cont_500_bf_scaffold_631_15
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16852..18033
DNA (1182bp) protein (394aa)
Acetyl-CoA C-acyltransferase (EC:2.3.1.16); K00632 acetyl-CoA acyltransferase [EC:2.3.1.16]
Acetyl-CoA C-acyltransferase {ECO:0000313|EMBL:ABE61254.1}; EC=2.3.1.16 {ECO:0000313|EMBL:ABE61254.1};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Acetyl-CoA C-acyltransferase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QR93_NITHX
SCNpilot_cont_500_bf_scaffold_631_16
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18182..19384
DNA (1203bp) protein (401aa)
pimeloyl-CoA dehydrogenase, large subunit; K00257 [EC:1.3.99.-] rbh
Pimeloyl-CoA dehydrogenase, large subunit n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UFF1_METS4 rbh
Pimeloyl-CoA dehydrogenase, large subunit {ECO:0000313|EMBL:ACA14805.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
SCNpilot_cont_500_bf_scaffold_631_17
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19441..19806)
DNA (366bp) protein (122aa)
Transcriptional regulator, XRE family n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F5X9_9RHIZ
Transcriptional regulator, XRE family {ECO:0000313|EMBL:CCV12702.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
XRE family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_631_18
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19813..20061)
DNA (249bp) protein (83aa)
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI00036B8852
Cytotoxic translational repressor of toxin-antitoxin stability system {ECO:0000313|EMBL:KJC38449.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_631_19
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20134..21282
DNA (1149bp) protein (383aa)
Acyl-CoA dehydrogenase domain protein n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UFF0_METS4 rbh
CaiA protein {ECO:0000313|EMBL:BAQ48921.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
acyl-CoA dehydrogenase domain-containing protein rbh
SCNpilot_cont_500_bf_scaffold_631_20
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21301..21765)
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI000308E46D
Uncharacterized protein {ECO:0000313|EMBL:EPE99479.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium grahamii CCGE 502.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_631_21
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21892..22302
DNA (411bp) protein (137aa)
Zn-dependent hydrolase, including glyoxylase n=1 Tax=Rubellimicrobium thermophilum DSM 16684 RepID=S9QYJ9_9RHOB
Beta-lactamase {ECO:0000313|EMBL:KKB76337.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
beta-lactamase
SCNpilot_cont_500_bf_scaffold_631_22
Bradyrhizobium sp. STM 3809, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22299..22700
DNA (402bp) protein (134aa)
beta-lactamase domain-containing protein (EC:3.1.2.6)
beta-lactamase n=1 Tax=Martelella mediterranea RepID=UPI000360812C
Putative enzyme with metallo-hydrolase/oxidoreductase domain (YcbL-like) {ECO:0000313|EMBL:CCE00335.1}; TaxID=551936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3809.;"
SCNpilot_cont_500_bf_scaffold_631_23
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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22762..23097
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11L76_MESSB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG61849.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCNpilot_cont_500_bf_scaffold_631_24
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23348..23830)
DNA (483bp) protein (161aa)
Transcription regulator AsnC-type-like protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HSD4_9RHIZ
Transcription regulator AsnC-type-like protein {ECO:0000313|EMBL:EHK56344.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
transcriptional regulator AsnC-type-like protein
SCNpilot_cont_500_bf_scaffold_631_25
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23970..25082
DNA (1113bp) protein (371aa)
4-hydroxyphenylpyruvate dioxygenase (EC:1.13.11.27); K00457 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
4-hydroxyphenylpyruvate dioxygenase {ECO:0000313|EMBL:AEH89432.1}; EC=1.13.11.27 {ECO:0000313|EMBL:AEH89432.1};; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
4-hydroxyphenylpyruvate dioxygenase n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y2G3_MESOW
SCNpilot_cont_500_bf_scaffold_631_26
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25293..25490)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BSE1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EIM72493.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
SCNpilot_cont_500_bf_scaffold_631_27
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25487..27112)
DNA (1626bp) protein (542aa)
FAD-dependent oxidoreductase; K05712 3-(3-hydroxy-phenyl)propionate hydroxylase [EC:1.14.13.127]
FAD-dependent oxidoreductase n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2M669_9RHIZ rbh
FAD-dependent oxidoreductase {ECO:0000313|EMBL:EKF17611.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
SCNpilot_cont_500_bf_scaffold_631_28
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27112..27648)
DNA (537bp) protein (179aa)
UPI0003CED41A related cluster n=1 Tax=unknown RepID=UPI0003CED41A
Putative damage inducible protein {ECO:0000313|EMBL:KFC63867.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
nuclease inhibitor
SCNpilot_cont_500_bf_scaffold_631_29
unknown

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comp(27645..27851)
DNA (207bp) protein (69aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_631_30
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27877..28827)
DNA (951bp) protein (317aa)
Metallo-beta-lactamase-like protein n=1 Tax=Nitratireductor indicus C115 RepID=K2NPE0_9RHIZ rbh
Metallo-beta-lactamase-like protein {ECO:0000313|EMBL:EKF41235.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
Metallo-beta-lactamase
Displaying items 1-30 of 72 in total

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