name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_500_bf_scaffold_1055_1
Methylophaga nitratireducenticrescens, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(285..2774)
|
hypothetical protein n=1 Tax=Comamonas sp. B-9 RepID=UPI00039568C4
rbh
TonB-dependent siderophore receptor; K02014 iron complex outermembrane recepter protein
rbh
Methylophaga nitratireducenticrescens strain JAM1, complete genome {ECO:0000313|EMBL:AFI83027.1}; Flags: Precursor;; TaxID=754476 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Methylophaga.;" source="Methylophaga nitratireducenticrescens (strain ATCC BAA-2433 / DSM; 25689 / JAM1).;"
|
|
SCNpilot_cont_500_bf_scaffold_1055_2
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2901..3857)
|
FecR protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WV78_9BRAD
rbh
FecR protein {ECO:0000313|EMBL:EAQ36110.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
FecR protein; K07165 transmembrane sensor
rbh
|
|
SCNpilot_cont_500_bf_scaffold_1055_3
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4038..4541)
|
FecI-like protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WV79_9BRAD
rbh
FecI-like protein {ECO:0000313|EMBL:EAQ36111.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
fec I like protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily
|
|
SCNpilot_cont_500_bf_scaffold_1055_4
unknown
|
Not on your lists |
4745..4924
|
This feature has no annotations |
|
SCNpilot_cont_500_bf_scaffold_1055_5
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5539..5724
|
UPI0003CDF941 related cluster n=1 Tax=unknown RepID=UPI0003CDF941
Type I restriction enzyme EcoKI subunit R {ECO:0000313|EMBL:CEG09837.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
|
|
SCNpilot_cont_500_bf_scaffold_1055_6
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5721..6074
|
Conjugal transfer protein trbE n=2 Tax=Oligotropha carboxidovorans RepID=B6JJW1_OLICO
trbE2; conjugal transfer protein trbE; K03199 type IV secretion system protein VirB4
Conjugal transfer protein trbE {ECO:0000313|EMBL:AEI05262.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
|
|
SCNpilot_cont_500_bf_scaffold_1055_7
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6014..6976
|
P-type conjugative transfer protein TrbJ n=3 Tax=Oligotropha carboxidovorans RepID=B6JJW0_OLICO
trbJ2; P-type conjugal transfer protein TrbJ
P-type conjugal transfer protein TrbJ {ECO:0000313|EMBL:AEI05263.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
|
|
SCNpilot_cont_500_bf_scaffold_1055_8
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7035..8027
|
Conjugal transfer protein TrbG n=2 Tax=Oligotropha carboxidovorans RepID=B6JJV6_OLICO
rbh
conjugal transfer protein TrbG/VirB9/CagX; K03204 type IV secretion system protein VirB9
rbh
Conjugal transfer protein TrbG {ECO:0000313|EMBL:AEI05267.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
|
|
SCNpilot_cont_500_bf_scaffold_1055_9
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8024..9181
|
Conjugal transfer protein TrbI n=2 Tax=Oligotropha carboxidovorans RepID=F8BJW8_OLICM
trbI2; conjugal transfer protein TrbI; K03195 type IV secretion system protein VirB10
Conjugal transfer protein TrbI {ECO:0000313|EMBL:AEI05268.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
|
|
SCNpilot_cont_500_bf_scaffold_1055_10
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9184..9405
|
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JJV5_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI05269.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
|
|
SCNpilot_cont_500_bf_scaffold_1055_11
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9550..9840
|
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VP45_RHOPX
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:ADU42491.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
|
|
SCNpilot_cont_500_bf_scaffold_1055_12
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9837..10190
|
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00030B7912
Uncharacterized protein {ECO:0000313|EMBL:ENY79957.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
|
|
SCNpilot_cont_500_bf_scaffold_1055_13
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10187..10585
|
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VP47_RHOPX
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:ADU42493.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
|
|
SCNpilot_cont_500_bf_scaffold_1055_14
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10582..12240
|
Resolvase domain n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VP48_RHOPX
rbh
resolvase domain-containing protein
rbh
Resolvase domain {ECO:0000313|EMBL:ADU42494.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
|
|
SCNpilot_cont_500_bf_scaffold_1055_15
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12423..13784
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P5N4_9BRAD
Integrase {ECO:0000313|EMBL:ETR77534.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
phage integrase
|
|
SCNpilot_cont_500_bf_scaffold_1055_16
unknown
|
Not on your lists |
13823..14074
|
This feature has no annotations |
|
SCNpilot_cont_500_bf_scaffold_1055_17
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14294..15574)
|
Capsule biosynthesis enzymes related protein n=1 Tax=Rhizobium leguminosarum bv. viciae WSM1455 RepID=J0VD01_RHILV
rbh
Capsule biosynthesis enzymes related protein {ECO:0000313|EMBL:EJC71186.1}; TaxID=755176 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae WSM1455.;"
|
|
SCNpilot_cont_500_bf_scaffold_1055_18
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15564..15911)
|
Putative DNA binding protein n=2 Tax=Rhizobium leguminosarum RepID=Q1M6J3_RHIL3
putative DNA binding protein
Putative DNA binding protein {ECO:0000313|EMBL:CAK03140.1}; TaxID=216596 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae (strain 3841).;"
|
|
SCNpilot_cont_500_bf_scaffold_1055_19
bacterium YEK0313, Bacteria
|
Not on your lists |
16066..16506
|
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00037AA502
Uncharacterized protein {ECO:0000313|EMBL:CEJ12499.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
|
|
SCNpilot_cont_500_bf_scaffold_1055_20
bacterium YEK0313, Bacteria
|
Not on your lists |
comp(16529..17563)
|
Patatin n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q138G5_RHOPS
rbh
Putative sporulation hydrolase CotR {ECO:0000313|EMBL:CEJ12500.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
patatin
rbh
|
|
SCNpilot_cont_500_bf_scaffold_1055_21
bacterium YEK0313, Bacteria
|
Not on your lists |
comp(17560..18012)
|
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11KX3_MESSB
Uncharacterized protein {ECO:0000313|EMBL:CEJ12501.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
|
|
SCNpilot_cont_500_bf_scaffold_1055_22
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18012..19259)
|
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11KX2_MESSB
rbh
hypothetical protein
rbh
Uncharacterized protein {ECO:0000313|EMBL:ABG61953.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
|
|
SCNpilot_cont_500_bf_scaffold_1055_23
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19445..19765
|
Transcriptional regulator n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q138G2_RHOPS
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:ABE39527.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
|
|
SCNpilot_cont_500_bf_scaffold_1055_24
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19762..20685
|
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002F25C49
rbh
hypothetical protein
rbh
Uncharacterized protein {ECO:0000313|EMBL:ABE39528.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
|
|
SCNpilot_cont_500_bf_scaffold_1055_25
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20890..23322)
|
UPI0003CEEB63 related cluster n=1 Tax=unknown RepID=UPI0003CEEB63
Uncharacterized protein {ECO:0000313|EMBL:KFD25691.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
hypothetical protein
rbh
|
|
SCNpilot_cont_500_bf_scaffold_1055_26
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23319..23954)
|
UPI0003CEB5F9 related cluster n=1 Tax=unknown RepID=UPI0003CEB5F9
Uncharacterized protein {ECO:0000313|EMBL:CEG10593.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
|
|
SCNpilot_cont_500_bf_scaffold_1055_27
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23951..25705)
|
UPI0003CEFE0B related cluster n=1 Tax=unknown RepID=UPI0003CEFE0B
rbh
Uncharacterized protein {ECO:0000313|EMBL:KFD25689.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
hypothetical protein
|
|
SCNpilot_cont_500_bf_scaffold_1055_trna_1
unknown
|
Not on your lists |
comp(25875..25948)
|
transferRNA
|
|
SCNpilot_cont_500_bf_scaffold_1055_28
unknown
|
Not on your lists |
25898..26152
|
This feature has no annotations |
|
SCNpilot_cont_500_bf_scaffold_1055_29
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26327..26827)
|
Putative resolvase n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5ESP2_BRASB
resolvase
Putative resolvase {ECO:0000313|EMBL:ABQ39186.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
|