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SCNpilot_cont_500_bf_scaffold_1805

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1805_1
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..770
DNA (768bp) protein (256aa)
UPI0003D02C60 related cluster n=1 Tax=unknown RepID=UPI0003D02C60 rbh
Uncharacterized protein {ECO:0000313|EMBL:ESZ11239.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1805_2
unknown

Not on your lists

1370..1615
DNA (246bp) protein (82aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1805_3
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1885..2094
DNA (210bp) protein (70aa)
Cold-shock DNA-binding protein family n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11D48_MESSB
Cold shock protein Qin prophage {ECO:0000313|EMBL:CDX36689.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
cold-shock DNA-binding protein family protein; K03704 cold shock protein (beta-ribbon, CspA family)
SCNpilot_cont_500_bf_scaffold_1805_4
unknown

Not on your lists

2202..2429
DNA (228bp) protein (76aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003728397
SCNpilot_cont_500_bf_scaffold_1805_5
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2572..3084)
DNA (513bp) protein (171aa)
Exopolysaccharide synthesis n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NTP8_AZOS1
exopolysaccharide synthesis
Uncharacterized protein {ECO:0000313|EMBL:BAR57884.1}; TaxID=1355477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens.;"
SCNpilot_cont_500_bf_scaffold_1805_6
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3330..3797)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NRE9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS32947.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1805_7
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3870..4361)
DNA (492bp) protein (164aa)
Small heat shock protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98P38_RHILO
small heat shock protein
Small heat shock protein {ECO:0000313|EMBL:BAB54817.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_cont_500_bf_scaffold_1805_8
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4479..5180)
DNA (702bp) protein (234aa)
UPI0003CFB3E1 related cluster n=1 Tax=unknown RepID=UPI0003CFB3E1 rbh
Phosphoribosyltransferase {ECO:0000313|EMBL:ESZ14375.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
phosphoribosyltransferase; K07100
SCNpilot_cont_500_bf_scaffold_1805_9
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5459..5674
DNA (216bp) protein (72aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HSP8_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK56236.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1805_10
Burkholderia sp. AU4i, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5769..6830)
DNA (1062bp) protein (354aa)
NmrA-like protein n=1 Tax=Burkholderia vietnamiensis AU4i RepID=U2G9V0_BURVI
NmrA-like protein {ECO:0000313|EMBL:ERJ40087.1}; TaxID=1335308 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia sp. AU4i.;"
NmrA family protein
SCNpilot_cont_500_bf_scaffold_1805_11
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7028..7528
DNA (501bp) protein (167aa)
Transcriptional regulator, MarR family n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BSZ3_GRABC
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ABI62059.1}; TaxID=391165 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1).;"
SCNpilot_cont_500_bf_scaffold_1805_12
RIFOXYA1_FULL_Bacteriovorax_36_14_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(8236..8631)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q418_9BACT
heat shock protein Hsp20; K13993 HSP20 family protein
Tax=RIFOXYA1_FULL_Bacteriovorax_36_14_curated
SCNpilot_cont_500_bf_scaffold_1805_13
Candidatus Scalindua brodae, Candidatus Scalindua, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(8677..9102)
DNA (426bp) protein (142aa)
Similar to small heat shock protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q6Q1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KHE94100.1}; TaxID=237368 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Scalindua.;" source="Candidatus Scalindua brodae.;"
molecular chaperone; K13993 HSP20 family protein
SCNpilot_cont_500_bf_scaffold_1805_14
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9663..9992)
DNA (330bp) protein (110aa)
UPI0003CE9EC7 related cluster n=1 Tax=unknown RepID=UPI0003CE9EC7
Uncharacterized protein {ECO:0000313|EMBL:CDX22201.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1805_15
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10068..10340)
DNA (273bp) protein (91aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI00035D8E23
hypothetical protein
Msr2388 protein {ECO:0000313|EMBL:BAB49532.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_cont_500_bf_scaffold_1805_16
Aureimonas altamirensis, Aureimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10568..11044
DNA (477bp) protein (159aa)
Small heat shock protein hspD n=3 Tax=Ochrobactrum intermedium RepID=C4WQV9_9RHIZ
Molecular chaperone Hsp20 {ECO:0000313|EMBL:KHJ53309.1}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensis.;"
heat shock protein Hsp20; K04080 molecular chaperone IbpA
SCNpilot_cont_500_bf_scaffold_1805_17
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11138..11647
DNA (510bp) protein (170aa)
Hsp20/alpha crystallin family protein n=2 Tax=Ochrobactrum intermedium RepID=C4WQV8_9RHIZ rbh
Hsp20/alpha crystallin family protein {ECO:0000313|EMBL:EEQ94617.1}; TaxID=641118 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium LMG 3301.;"
molecular chaperone small heat shock protein, hsp20 family; K13993 HSP20 family protein
SCNpilot_cont_500_bf_scaffold_1805_18
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11723..12268
DNA (546bp) protein (182aa)
ETC complex I subunit region n=2 Tax=Ochrobactrum intermedium RepID=C4WQV7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ELT49277.1}; TaxID=1234597 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium M86.;"
NADH-ubiquinone oxidoreductase
SCNpilot_cont_500_bf_scaffold_1805_19
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12384..13190)
DNA (807bp) protein (269aa)
Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y9L2_MESOW rbh
putative Crp/Fnr family transcriptional regulator rbh
Putative transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:AEH88738.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_cont_500_bf_scaffold_1805_20
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13408..13716
DNA (309bp) protein (103aa)
KaiB domain protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y9L3_MESOW
KaiB domain-containing protein; K08481 circadian clock protein KaiB
KaiB domain protein {ECO:0000313|EMBL:AEH88739.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_cont_500_bf_scaffold_1805_21
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13713..15203
DNA (1491bp) protein (497aa)
putative circadian clock protein, KaiC (EC:2.7.11.1); K08482 circadian clock protein KaiC rbh
Putative circadian clock protein, KaiC {ECO:0000313|EMBL:AEH88740.1}; EC=2.7.11.1 {ECO:0000313|EMBL:AEH88740.1};; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
Putative circadian clock protein, KaiC n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y9L4_MESOW rbh
SCNpilot_cont_500_bf_scaffold_1805_22
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15215..16330
DNA (1116bp) protein (372aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y9L5_MESOW rbh
PAS/PAC sensor signal transduction histidine kinase rbh
SCNpilot_cont_500_bf_scaffold_1805_23
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16427..16990
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NWZ8_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS33024.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
response regulator
SCNpilot_cont_500_bf_scaffold_1805_24
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17209..17523
DNA (315bp) protein (105aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI00037B0274
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV15073.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
Displaying 24 items

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