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SCNpilot_cont_500_bf_scaffold_1914

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1914_1
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..419
DNA (417bp) protein (139aa)
Lytic transglycosylase catalytic n=2 Tax=Afipia RepID=D6V0Y0_9BRAD
Lytic transglycosylase catalytic {ECO:0000313|EMBL:EFI53360.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
lytic transglycosylase
SCNpilot_cont_500_bf_scaffold_1914_2
Gluconacetobacter diazotrophicus, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

774..2513
DNA (1740bp) protein (580aa)
Uncharacterized protein n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=B5ZHR0_GLUDA rbh
Uncharacterized protein {ECO:0000313|EMBL:ACI52538.1}; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 /; PAl5).;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_1914_3
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2555..4537
DNA (1983bp) protein (661aa)
Conjugal transfer protein traG n=1 Tax=Azospirillum amazonense Y2 RepID=G1XXY2_9PROT rbh
Conjugal transfer protein traG {ECO:0000313|EMBL:EGY01876.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;"
conjugal transfer coupling protein TraG; K03205 type IV secretion system protein VirD4 rbh
SCNpilot_cont_500_bf_scaffold_1914_4
Gluconacetobacter diazotrophicus, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4545..4991
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=B5ZHS3_GLUDA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACI52551.1}; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 /; PAl5).;"
SCNpilot_cont_500_bf_scaffold_1914_5
Gluconacetobacter diazotrophicus, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5242..6183
DNA (942bp) protein (314aa)
P-type conjugative transfer ATPase TrbB n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=B5ZHS8_GLUDA rbh
P-type conjugative transfer ATPase TrbB; K03196 type IV secretion system protein VirB11 rbh
P-type conjugative transfer ATPase TrbB {ECO:0000313|EMBL:ACI52556.1}; Flags: Precursor;; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 /; PAl5).;"
SCNpilot_cont_500_bf_scaffold_1914_6
Gluconacetobacter diazotrophicus, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6180..6521
DNA (342bp) protein (114aa)
Conjugal transfer protein TrbC n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=B5ZHS9_GLUDA
conjugal transfer protein Trbc; K03197 type IV secretion system protein VirB2
Conjugal transfer protein TrbC {ECO:0000313|EMBL:ACI52557.1}; Flags: Precursor;; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 /; PAl5).;"
SCNpilot_cont_500_bf_scaffold_1914_7
Gluconacetobacter diazotrophicus, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6521..6796
DNA (276bp) protein (92aa)
Type IV secretory pathway VirB3 family protein n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=B5ZHT0_GLUDA
type IV secretory pathway VirB3 family protein; K03198 type IV secretion system protein VirB3
Type IV secretory pathway VirB3 family protein {ECO:0000313|EMBL:ACI52558.1}; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 /; PAl5).;"
SCNpilot_cont_500_bf_scaffold_1914_8
Gluconacetobacter diazotrophicus, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6804..9242
DNA (2439bp) protein (813aa)
AAA ATPase n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=B5ZHT1_GLUDA
AAA ATPase {ECO:0000313|EMBL:ACI52559.1}; Flags: Precursor;; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 /; PAl5).;"
conjugal transfer ATPase TrbE; K03199 type IV secretion system protein VirB4
SCNpilot_cont_500_bf_scaffold_1914_9
Gluconacetobacter diazotrophicus, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9239..9976
DNA (738bp) protein (246aa)
P-type conjugative transfer protein TrbJ n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=B5ZHT2_GLUDA rbh
conjugal transfer protein TrbJ rbh
P-type conjugative transfer protein TrbJ {ECO:0000313|EMBL:ACI52560.1}; Flags: Precursor;; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 /; PAl5).;"
SCNpilot_cont_500_bf_scaffold_1914_10
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9986..10312
DNA (327bp) protein (109aa)
Uncharacterized protein n=2 Tax=Afipia RepID=D6V0W9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS30463.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1914_11
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10309..11670
DNA (1362bp) protein (454aa)
P-type conjugative transfer protein TrbL n=2 Tax=Afipia RepID=K8NPW3_AFIFE
P-type conjugative transfer protein TrbL {ECO:0000313|EMBL:EKS30464.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
conjugal transfer protein TrbL; K07344 type IV secretion system protein TrbL rbh
SCNpilot_cont_500_bf_scaffold_1914_12
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11673..12362
DNA (690bp) protein (230aa)
Conjugal transfer protein trbF n=1 Tax=Azospirillum amazonense Y2 RepID=G1XXZ7_9PROT
Conjugal transfer protein trbF {ECO:0000313|EMBL:EGY01849.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;"
conjugal transfer protein TrbF; K03200 type IV secretion system protein VirB5 rbh
SCNpilot_cont_500_bf_scaffold_1914_13
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12359..13432
DNA (1074bp) protein (358aa)
P-type conjugative transfer protein TrbG n=2 Tax=Afipia RepID=D6V0W5_9BRAD rbh
P-type conjugative transfer protein TrbG {ECO:0000313|EMBL:EFI53345.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
P-type conjugative transfer protein TrbG; K03204 type IV secretion system protein VirB9 rbh
SCNpilot_cont_500_bf_scaffold_1914_14
Gluconacetobacter diazotrophicus, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13429..14637
DNA (1209bp) protein (403aa)
Conjugation TrbI family protein n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=B5ZHT7_GLUDA
conjugation TrbI family protein; K03195 type IV secretion system protein VirB10
Conjugation TrbI family protein {ECO:0000313|EMBL:ACI52565.1}; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 /; PAl5).;"
SCNpilot_cont_500_bf_scaffold_1914_15
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14634..14894
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=Woodsholea maritima RepID=UPI000375AF7D
Uncharacterized protein {ECO:0000313|EMBL:ETR77818.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1914_16
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14858..15793)
DNA (936bp) protein (312aa)
Transcriptional regulator, LysR family n=2 Tax=Afipia RepID=D6V0W2_9BRAD rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EFI53342.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
transcriptional regulator rbh
SCNpilot_cont_500_bf_scaffold_1914_17
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15929..16210)
DNA (282bp) protein (94aa)
Mercuric transport protein periplasmic component n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFJ6_NITHX
Periplasmic mercury ion-binding protein {ECO:0000256|RuleBase:RU361212}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
mercuric transport protein periplasmic protein; K08364 periplasmic mercuric ion binding protein
SCNpilot_cont_500_bf_scaffold_1914_18
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16582..17256)
DNA (675bp) protein (225aa)
Cytochrome c biogenesis protein n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QSW7_9BRAD
Cytochrome c biogenesis protein {ECO:0000313|EMBL:EIG62873.1}; Flags: Precursor;; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
cytochrome c biogenesis protein, transmembrane region
SCNpilot_cont_500_bf_scaffold_1914_19
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17256..17516)
DNA (261bp) protein (87aa)
Thioredoxin/glutaredoxin n=3 Tax=Oligotropha carboxidovorans RepID=F8BR05_OLICM
Redox-active disulfide protein 1 {ECO:0000313|EMBL:CEG10187.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
thioredoxin/glutaredoxin
SCNpilot_cont_500_bf_scaffold_1914_20
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17988..19205)
DNA (1218bp) protein (406aa)
MFS transporter n=2 Tax=Oligotropha carboxidovorans RepID=F8BR07_OLICM
L-galactonate transporter {ECO:0000313|EMBL:CEG10189.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
major facilitator superfamily protein
SCNpilot_cont_500_bf_scaffold_1914_21
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19244..21697)
DNA (2454bp) protein (818aa)
Heavy metal translocating P-type ATPase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFJ0_NITHX
heavy metal translocating P-type ATPase
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:ABE65007.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_1914_22
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21915..22385)
DNA (471bp) protein (157aa)
MerR family transcriptional regulator n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J2L6_ACIMA
MerR family transcriptional regulator
MerR family transcriptional regulator {ECO:0000313|EMBL:BAJ81960.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
SCNpilot_cont_500_bf_scaffold_1914_23
Pseudoalteromonas rubra, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22508..22723)
DNA (216bp) protein (72aa)
hcnC; hydrogen cyanide synthase HcnC; K10816 hydrogen cyanide synthase HcnC [EC:1.4.99.5]
Hydrogen cyanide synthase HcnC n=1 Tax=Pseudoalteromonas rubra ATCC 29570 RepID=U1KEK6_9GAMM
Hydrogen cyanide synthase HcnC {ECO:0000313|EMBL:ERG45294.1}; TaxID=1117318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoalteromonas rubra ATCC 29570.;"
SCNpilot_cont_500_bf_scaffold_1914_24
unknown

Not on your lists

22883..23515
DNA (633bp) protein (211aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1914_25
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23928..25361)
DNA (1434bp) protein (478aa)
Mercuric reductase n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B9H0_9RHIZ
mercuric reductase
Mercuric reductase {ECO:0000313|EMBL:AGK57181.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCNpilot_cont_500_bf_scaffold_1914_26
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25358..25615)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BAM4_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK57180.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCNpilot_cont_500_bf_scaffold_1914_27
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25647..25955)
DNA (309bp) protein (103aa)
Putative mercuric transport protein, periplasmic n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B130_9RHIZ
putative mercuric transport protein, periplasmic
Putative mercuric transport protein, periplasmic {ECO:0000313|EMBL:AGK57179.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCNpilot_cont_500_bf_scaffold_1914_28
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26026..26442)
DNA (417bp) protein (139aa)
Mercuric transport protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B2I9_9RHIZ
mercuric transport protein
Mercuric transport protein {ECO:0000313|EMBL:AGK57178.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCNpilot_cont_500_bf_scaffold_1914_29
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26527..26955
DNA (429bp) protein (143aa)
MerR family transcriptional regulator n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B4M3_9RHIZ
MerR family transcriptional regulator
MerR family transcriptional regulator {ECO:0000313|EMBL:AGK57177.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCNpilot_cont_500_bf_scaffold_1914_30
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27106..27306)
DNA (201bp) protein (67aa)
Cytochrome c biogenesis protein transmembrane region n=1 Tax=Afipia sp. 1NLS2 RepID=D6V504_9BRAD
Cytochrome c biogenesis protein transmembrane region {ECO:0000313|EMBL:EFI53034.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
Displaying items 1-30 of 33 in total

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