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SCNpilot_cont_500_bf_scaffold_224_13

Organism: SCNPILOT_CONT_500_BF_Mesorhizobium_64_28

partial RP 27 / 55 MC: 1 BSCG 29 / 51 ASCG 10 / 38 MC: 2
Location: 12587..13099

Top 3 Functional Annotations

Value Algorithm Source
putative 3-isopropylmalate dehydratase, small subunit; K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] similarity KEGG
DB: KEGG
  • Identity: 74.5
  • Coverage: 161.0
  • Bit_score: 262
  • Evalue 7.40e-68
Putative 3-isopropylmalate dehydratase, small subunit n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZDM3_AZOL4 similarity UNIREF
DB: UNIREF100
  • Identity: 74.5
  • Coverage: 161.0
  • Bit_score: 262
  • Evalue 2.30e-67
3-isopropylmalate dehydratase {ECO:0000313|EMBL:KJR61895.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.8
  • Coverage: 161.0
  • Bit_score: 268
  • Evalue 7.80e-69

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Taxonomy

Azospirillum thiophilum → Azospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 513
ATGTCTCTCCAGAATCTACGCGGCAGGGTCGCCTTCGTCTTCGACGAGATCAATTTCGACGTCGACCAGATCGTCGGGGTCAAGAACATCAAGATCACGGATATCGAGGAACTGGCGCAGGCGGCGATGCAGTCCTACGATCCCGGCTTCCGCGACAAGGTGAAGCTCGGCGACGTCATCGTCGGCAACCACAATTTCGGCTACGGCCATCCGCACTATCCGCCGATGCGCGCGATGCGCCATCTCGGCATCGCCGGCGTCGTCGCCGAATCCTTCGCGCCCGGCTACTGGCGCGGCGAGATCAGCATGGGATTTCCGCAGGCGAGCTGCCCGGGCATTCTCGGCCTAGTGGAGCGCTGGGACGAGATCGAGGTCGACTGGCAGGCAAACGAAGTCCGCAACCTCACCAAGGGCGCGTCGCTGCCGATGGAACCCCTATCCTTCGCGGACCACGAGATGCTCGATGCCGGCGGCCTGCTTCCCTACCTGAAACGCTCGCAAAACGTTGCATGA
PROTEIN sequence
Length: 171
MSLQNLRGRVAFVFDEINFDVDQIVGVKNIKITDIEELAQAAMQSYDPGFRDKVKLGDVIVGNHNFGYGHPHYPPMRAMRHLGIAGVVAESFAPGYWRGEISMGFPQASCPGILGLVERWDEIEVDWQANEVRNLTKGASLPMEPLSFADHEMLDAGGLLPYLKRSQNVA*