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SCNpilot_cont_500_bf_scaffold_224

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Displaying items 1-30 of 311 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_224_1
Mesorhizobium sp. LSHC412B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..357)
DNA (357bp) protein (119aa)
UPI0003CF35F3 related cluster n=1 Tax=unknown RepID=UPI0003CF35F3
XRE family transcriptional regulator {ECO:0000313|EMBL:ESX84805.1}; TaxID=1287285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC412B00.;"
helix-turn-helix domain-containing protein
SCNpilot_cont_500_bf_scaffold_224_2
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(357..563)
DNA (207bp) protein (69aa)
UPI0003D0042B related cluster n=1 Tax=unknown RepID=UPI0003D0042B
Uncharacterized protein {ECO:0000313|EMBL:ESZ12221.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_224_3
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2512..3429)
DNA (918bp) protein (306aa)
transcriptional regulator n=1 Tax=Ochrobactrum anthropi RepID=UPI000287EE14 rbh
Transcriptional regulator {ECO:0000313|EMBL:EXL03343.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
LysR family transcriptional regulator rbh
SCNpilot_cont_500_bf_scaffold_224_4
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3571..4206
DNA (636bp) protein (212aa)
NAD-dependent dehydratase n=1 Tax=Pseudochrobactrum sp. AO18b RepID=UPI0003A8E59F rbh
NAD-dependent dehydratase {ECO:0000313|EMBL:EXL03344.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
NAD-dependent epimerase/dehydratase
SCNpilot_cont_500_bf_scaffold_224_5
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4264..5190
DNA (927bp) protein (309aa)
alpha/beta hydrolase n=1 Tax=Pseudochrobactrum sp. AO18b RepID=UPI0003A5F317 rbh
Alpha/beta hydrolase {ECO:0000313|EMBL:EXL03345.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
alpha/beta superfamily hydrolase; K06889 rbh
SCNpilot_cont_500_bf_scaffold_224_6
Burkholderia jiangsuensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5996..6826
DNA (831bp) protein (277aa)
IclR family transcriptional regulator n=1 Tax=Burkholderia sp. SJ98 RepID=K8QXY1_9BURK
IclR family transcriptional regulator {ECO:0000313|EMBL:KAK44203.1}; TaxID=1458357 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia jiangsuensis.;"
iclR; IclR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_224_7
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6823..7599
DNA (777bp) protein (259aa)
ABC transporter, membrane spanning protein n=1 Tax=Agrobacterium tumefaciens (strain C58 / ATCC 33970) RepID=A9CGV6_AGRT5
ABC transporter, membrane spanning protein {ECO:0000313|EMBL:CDN95355.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
ABC transporter permease; K02050 NitT/TauT family transport system permease protein
SCNpilot_cont_500_bf_scaffold_224_8
Rhizobium sp. UR51a, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7628..8596
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens (strain C58 / ATCC 33970) RepID=A9CGV5_AGRT5
hypothetical protein; K02051 NitT/TauT family transport system substrate-binding protein
Hydroxymethylpyrimidine ABC transporter, substrate-binding component {ECO:0000313|EMBL:KIV65859.1}; TaxID=1604021 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. UR51a.;"
SCNpilot_cont_500_bf_scaffold_224_9
Agrobacterium sp. H13-3, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8586..9401
DNA (816bp) protein (272aa)
ABC transporter ATPase (EC:3.6.3.31); K02049 NitT/TauT family transport system ATP-binding protein
ABC transporter ATP-binding protein n=1 Tax=Agrobacterium sp. 10MFCol1.1 RepID=UPI0003657530
ABC transporter, nucleotide binding/ATPase protein {ECO:0000313|EMBL:ADY66012.1}; TaxID=861208 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. (strain H13-3) (Rhizobium lupini (strain H13-3)).;"
SCNpilot_cont_500_bf_scaffold_224_10
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

9421..10002
DNA (582bp) protein (194aa)
intracellular proteinase I (EC:3.2.-.-); K05520 protease I [EC:3.2.-.-]
Probable intracellular proteinase I n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C3C3_9PLAN
Probable intracellular proteinase I {ECO:0000313|EMBL:EDL60718.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
SCNpilot_cont_500_bf_scaffold_224_11
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10393..11283
DNA (891bp) protein (297aa)
Putative Beta-lactamase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZCT4_AZOL4 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJR61562.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
Putative Beta-lactamase rbh
SCNpilot_cont_500_bf_scaffold_224_12
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11321..12577
DNA (1257bp) protein (419aa)
putative 3-isopropylmalate dehydratase, large subunit; K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] rbh
Putative 3-isopropylmalate dehydratase, large subunit {ECO:0000313|EMBL:CBS89617.1}; EC=4.2.1.33 {ECO:0000313|EMBL:CBS89617.1};; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
Putative 3-isopropylmalate dehydratase, large subunit n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZDM2_AZOL4 rbh
SCNpilot_cont_500_bf_scaffold_224_13
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12587..13099
DNA (513bp) protein (171aa)
putative 3-isopropylmalate dehydratase, small subunit; K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
Putative 3-isopropylmalate dehydratase, small subunit n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZDM3_AZOL4
3-isopropylmalate dehydratase {ECO:0000313|EMBL:KJR61895.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
SCNpilot_cont_500_bf_scaffold_224_14
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13112..14005
DNA (894bp) protein (298aa)
Putative Carboxyvinyl-carboxyphosphonate phosphorylmutase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZDM4_AZOL4 rbh
putative Carboxyvinyl-carboxyphosphonate phosphorylmutase rbh
Putative Carboxyvinyl-carboxyphosphonate phosphorylmutase {ECO:0000313|EMBL:CBS89619.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
SCNpilot_cont_500_bf_scaffold_224_15
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14093..15676
DNA (1584bp) protein (528aa)
Putative alpha/beta hydrolase fold-1 n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZCT2_AZOL4 rbh
putative alpha/beta hydrolase fold-1 rbh
Putative alpha/beta hydrolase fold-1 {ECO:0000313|EMBL:CBS89613.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
SCNpilot_cont_500_bf_scaffold_224_16
Hippea maritima, Hippea, Desulfurellales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15692..16387)
DNA (696bp) protein (232aa)
Polyamine-transporting ATPase {ECO:0000313|EMBL:AEA33028.1}; EC=3.6.3.31 {ECO:0000313|EMBL:AEA33028.1};; TaxID=760142 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfurellales; Desulfurellaceae; Hippea.;" source="Hippea maritima (strain ATCC 700847 / DSM 10411 / MH2).;"
hypothetical protein n=1 Tax=Nocardia sp. BMG111209 RepID=UPI00036CF87C
polyamine-transporting ATPase; K01996 branched-chain amino acid transport system ATP-binding protein
SCNpilot_cont_500_bf_scaffold_224_17
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16359..17168)
DNA (810bp) protein (270aa)
UPI0003D62D31 related cluster n=1 Tax=unknown RepID=UPI0003D62D31
ABC transporter; K01995 branched-chain amino acid transport system ATP-binding protein
Tax=RBG_16_Anaeromyxobacter_69_14_curated
SCNpilot_cont_500_bf_scaffold_224_18
CG_Anaero_03, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(17161..18045)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2MSC3_9ACTO
branched-chain amino acid ABC transporter permease; K01998 branched-chain amino acid transport system permease protein
Tax=CG_Anaero_03
SCNpilot_cont_500_bf_scaffold_224_19
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18048..18935)
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2M8G1_9ACTO
livH; high-affinity branched-chain amino acid ABC transporter (permease protein)
High-affinity branched-chain amino acid ABC transporter (Permease protein) {ECO:0000313|EMBL:CCD02108.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
SCNpilot_cont_500_bf_scaffold_224_20
Arthrobacter nitrophenolicus, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18936..20108)
DNA (1173bp) protein (391aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2MRN7_9ACTO
Branched chain amino acid ABC transporter permease {ECO:0000313|EMBL:ELT42953.1}; TaxID=683150 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter nitrophenolicus.;"
putative Extracellular ligand-binding receptor
SCNpilot_cont_500_bf_scaffold_224_21
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20398..21192)
DNA (795bp) protein (265aa)
Transcriptional regulator, IclR family n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZCT3_AZOL4
IclR family transcriptional regulator
Transcriptional regulator, IclR family {ECO:0000313|EMBL:CBS89614.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
SCNpilot_cont_500_bf_scaffold_224_22
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21450..23042
DNA (1593bp) protein (531aa)
Putative FAD-linked oxidase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZDM1_AZOL4 rbh
putative FAD-linked oxidase rbh
Putative FAD-linked oxidase {ECO:0000313|EMBL:CBS89616.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
SCNpilot_cont_500_bf_scaffold_224_23
Agrobacterium fabrum, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23094..23873)
DNA (780bp) protein (260aa)
IclR family transcriptional regulator n=1 Tax=Agrobacterium sp. 10MFCol1.1 RepID=UPI000369C0ED
IclR family transcriptional regulator
Transcriptional regulator, IclR family {ECO:0000313|EMBL:AAK88846.2}; TaxID=176299 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium fabrum (strain C58 / ATCC 33970) (Agrobacterium; tumefaciens (strain C58)).;"
SCNpilot_cont_500_bf_scaffold_224_24
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23870..24697)
DNA (828bp) protein (276aa)
ABC transporter, nucleotide binding/ATPase protein n=1 Tax=Agrobacterium tumefaciens (strain C58 / ATCC 33970) RepID=A9CGV7_AGRT5 rbh
ABC transporter, nucleotide binding/ATPase protein {ECO:0000313|EMBL:CDN95356.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
ABC transporter permease; K02049 NitT/TauT family transport system ATP-binding protein rbh
SCNpilot_cont_500_bf_scaffold_224_25
Agrobacterium fabrum, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24779..25624
DNA (846bp) protein (282aa)
ABC transporter, membrane spanning protein n=1 Tax=Agrobacterium tumefaciens (strain C58 / ATCC 33970) RepID=A9CGV6_AGRT5
ABC transporter permease; K02050 NitT/TauT family transport system permease protein
ABC transporter, membrane spanning protein {ECO:0000313|EMBL:AAK88848.1}; TaxID=176299 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium fabrum (strain C58 / ATCC 33970) (Agrobacterium; tumefaciens (strain C58)).;"
SCNpilot_cont_500_bf_scaffold_224_26
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25659..26645
DNA (987bp) protein (329aa)
sulfonate ABC transporter substrate-binding protein n=1 Tax=Agrobacterium sp. 10MFCol1.1 RepID=UPI0003808AFB
Putative sulfonate/nitrate transport system substrate-binding protein {ECO:0000313|EMBL:CDN95354.1}; Flags: Precursor;; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
putative sulfonate/nitrate transport system substrate-binding protein
SCNpilot_cont_500_bf_scaffold_224_27
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26701..27438
DNA (738bp) protein (246aa)
3-oxoacyl-ACP reductase (EC:1.1.1.100); K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
3-oxoacyl-ACP reductase n=1 Tax=Agrobacterium sp. 10MFCol1.1 RepID=UPI0003789E1A
Dehydrogenase {ECO:0000313|EMBL:CDN95353.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
SCNpilot_cont_500_bf_scaffold_224_28
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27450..28136
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens (strain C58 / ATCC 33970) RepID=A9CGV4_AGRT5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJX85701.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
SCNpilot_cont_500_bf_scaffold_224_29
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28261..28905
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens 5A RepID=H0HCJ2_RHIRD
Strain MEJ076 contig_5, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ04100.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_224_30
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29118..30350)
DNA (1233bp) protein (411aa)
cyclopropane-fatty-acyl-phospholipid synthase; K00574 cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] rbh
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NUL1_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS29913.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
Displaying items 1-30 of 311 in total

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