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SCNpilot_cont_500_bf_scaffold_244_134

Organism: SCNPILOT_CONT_500_BF_Mesorhizobium_64_28

partial RP 27 / 55 MC: 1 BSCG 29 / 51 ASCG 10 / 38 MC: 2
Location: comp(134876..135715)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoH n=7 Tax=Rhodobacter capsulatus RepID=D5AP35_RHOCB similarity UNIREF
DB: UNIREF100
  • Identity: 61.8
  • Coverage: 293.0
  • Bit_score: 341
  • Evalue 8.50e-91
rpoH2; RNA polymerase sigma-32 factor; K03089 RNA polymerase sigma-32 factor similarity KEGG
DB: KEGG
  • Identity: 61.8
  • Coverage: 293.0
  • Bit_score: 341
  • Evalue 2.70e-91
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=1415161 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter capsulatus Y262.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.8
  • Coverage: 293.0
  • Bit_score: 341
  • Evalue 1.20e-90

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Taxonomy

Rhodobacter capsulatus → Rhodobacter → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 840
ATGGCCCAAAGCTTACCCAGTATCGTTTCCGGTGAAGGCGGTCTGTCGCGGTATCTCGAGGAGATACGCCGCTTTCCCATGCTGCAGCCGCAGGAAGAGTACATGCTCGCCAAGCGCTACAGCGAACATGGCGACACCAACGCCGCGCACAAGCTCGTGACCAGCCATCTGCGCCTCGTGGCGAAGATCGCCATGGGCTATCGCGGTTATGGCCTGCCGATCGGCGAGGCGACCTATGCCATGTGGTGGATCAAGGCCTCGATCCAGGAATATATCCTGCGCTCGTGGAGCCTCGTGAAGATGGGCACGACGGCCAACCAGAAGCGGCTGTTCTTCAACCTGCGCAAGGTGAAGGGCAAGATCCAGGCGCTCGACGAGGGCGACCTCAAGCCCGACCAGGTCAGCGAGATCGCGACCCGCCTCAACGTCAGCGAGGACGAAGTGGTCTCCATGAACCGCCGCCTCTCCGGTGACGCCTCTCTCAACGCGCCGATCCGCGCTAGCGAGGGCGAATCCGGCGAATGGCAGGACTGGCTGGTCGACGACCACGAGAGCCAGGAGCAGATGCTGGTCGAGCAGGACGAGCTGGAAAACCGGCGCGGCATGCTCGGTGAGGCCTTGACGGTCCTGAACGACCGCGAACGCCGGATCTTCGAGGCGCGGCGTCTCTCCGACGAACCGATGACGCTGGAGGAACTGTCCGCCGAATTCGGCATCAGCCGCGAGCGCGTCCGCCAGATCGAGGTCAGGGCGTTCGAGAAGGTGCAGGACGCGGTGAAGGCGGCCGCCAAGCGGCAGGCGCAGTCGCTCCGCACCATTGAGGCCGAAGCGCATCCGTGA
PROTEIN sequence
Length: 280
MAQSLPSIVSGEGGLSRYLEEIRRFPMLQPQEEYMLAKRYSEHGDTNAAHKLVTSHLRLVAKIAMGYRGYGLPIGEATYAMWWIKASIQEYILRSWSLVKMGTTANQKRLFFNLRKVKGKIQALDEGDLKPDQVSEIATRLNVSEDEVVSMNRRLSGDASLNAPIRASEGESGEWQDWLVDDHESQEQMLVEQDELENRRGMLGEALTVLNDRERRIFEARRLSDEPMTLEELSAEFGISRERVRQIEVRAFEKVQDAVKAAAKRQAQSLRTIEAEAHP*