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SCNpilot_cont_500_bf_scaffold_235_87

Organism: SCNPILOT_CONT_500_BF_Mesorhizobium_64_28

partial RP 27 / 55 MC: 1 BSCG 29 / 51 ASCG 10 / 38 MC: 2
Location: 98943..99521

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CDF12D related cluster n=1 Tax=unknown RepID=UPI0003CDF12D similarity UNIREF
DB: UNIREF100
  • Identity: 66.7
  • Coverage: 183.0
  • Bit_score: 237
  • Evalue 1.20e-59
RNA polymerase sigma70 factor {ECO:0000313|EMBL:ESW79846.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.7
  • Coverage: 183.0
  • Bit_score: 237
  • Evalue 1.70e-59
putative RNA polymerase sigma factor containing a TPR repeat domain similarity KEGG
DB: KEGG
  • Identity: 66.7
  • Coverage: 186.0
  • Bit_score: 235
  • Evalue 1.40e-59

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Taxonomy

Mesorhizobium sp. LSJC280B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 579
ATGCCGAACGAGCCGGAAGCGCTCGGGCTCGTCTCGCTGATGCTTTTCGCCGAAGCACGCCGGGCAGCCCGCCGCGACACAAATGGCGGCTACGTGCCGCTTGCCGAGCAGGACGTGACGAAATGGGACCAGACCCTGATCACGGAAGCGGAGGGCCTGTTGCTCCGGGCTTCAGCCATGGGGAGACCGGGACGCTACCAGATCGAGGCGGCCATACAGTCGGCGCATGTCGTCCGGCGCAGCACGGGACAGGCGGACTGGCGGGCGATCGTCGATCTCTACGGGGTACTTGCCGCCATGGTCCCCTCGCCCGTCGTCGCCGTCAATCGCGCCGTGGCGGTCGCCCAGGCGGGGCATGCCGGCGACGCGCTTGCCGCGCTCGACGAACTCGCCGACGATCCGCGCCTTGCCGACTATCAGCCCTATTGGGCGGCGCGCGCGGAACTCCTCGCCCGCGCCGGCAAACAGGCCGAGGCCGCGACCGCCTATGACCGGGCGATCGGCCTCGAGCCCGATCCGTCGGTGCGGGCTTTCCTGCAAGAAAGGCGCATGGCCATGAAACCGCAGACATCTTCATGA
PROTEIN sequence
Length: 193
MPNEPEALGLVSLMLFAEARRAARRDTNGGYVPLAEQDVTKWDQTLITEAEGLLLRASAMGRPGRYQIEAAIQSAHVVRRSTGQADWRAIVDLYGVLAAMVPSPVVAVNRAVAVAQAGHAGDALAALDELADDPRLADYQPYWAARAELLARAGKQAEAATAYDRAIGLEPDPSVRAFLQERRMAMKPQTSS*