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SCNpilot_cont_500_bf_scaffold_235_201

Organism: SCNPILOT_CONT_500_BF_Mesorhizobium_64_28

partial RP 27 / 55 MC: 1 BSCG 29 / 51 ASCG 10 / 38 MC: 2
Location: 217711..219222

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CFBFEA related cluster n=1 Tax=unknown RepID=UPI0003CFBFEA similarity UNIREF
DB: UNIREF100
  • Identity: 70.6
  • Coverage: 507.0
  • Bit_score: 704
  • Evalue 9.00e-200
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.1
  • Coverage: 509.0
  • Bit_score: 717
  • Evalue 1.10e-203
RNA polymerase sigma-54 subunit RpoN; K03092 RNA polymerase sigma-54 factor similarity KEGG
DB: KEGG
  • Identity: 69.9
  • Coverage: 508.0
  • Bit_score: 698
  • Evalue 1.20e-198

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Taxonomy

Mesorhizobium plurifarium → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1512
ATGGGGCTCTCGGCCAGGCTGCAACTGAGGCAGTCGCAATCGCTGGTGATGACGCCGCAGCTGATGCAGTCGATCAGGCTGCTGCAGCTGAGCCATGCCGAGCTCGAGGCTTTCATCGACCAGGAAATCGAGCGCAATCCGCTGGTGGAACGCGGCGAGGATGCAAGCGGGGCGGCAGCCGGCGACACGCCTGACGGCGCGGACGCCGAGCCGCCGCCCGAAAGCGGCCCGGAGCCGGAATGGACGGCGGCTTCCATCTCGGATCGGCTCGACGCTTCGCTGGAGAATGTCTTTCCCGACGATCCGGGCGTGCGCGAGAGGATCGGCCCCGACCTCGCGGCGCAGTGGAAGTCGGCACATGGCGGGAGCGGCACATTCGACGGCGACGGGTTCGATCTGGAGGAGGTCGTATCCGCGCCGGTGACGCTGAACGATCATTTGCGCGAGCAGATCGCCTTCGCCTTCACCGACCCCGTCAAAAGAGCCGTTGCCGCCGAGCTTGCCGGCAGCCTCGACGAAAGCGGCTACCTGCGCACGGAGCTTCCGGAGATCGCGGCACGGCTGGGCATCGAGGAAGAGACAGTCGCCGAGACGCTTTCCACCTGCCAGGGTTTTGATCCGCCCGGCATTTTCGCCCGCGACCTCGCGGAATGCCTGGCGCTGCAGCTTCACGCGCGCGACCGGCTCGATCCCGCGATGGCGGCGCTGCTCCGGAACCTGGAACTCCTGGCGCGCCGCGATTTCCAGGCGCTCTCCCGGCTATGCGGCGTCGGCCAGGAGGATCTGCTCGACATGCTGGCCGAAATCCGCGCGCTCGATCCCAAGCCGGGCATGGCCTTTGCCGGCGGCACCGCCGACGTCGTCGTGCCCGATGTCCTCGTGCGCCCGGCGCCGGACGGGAGCTGGCAGGTCGAGCTCAATCCCGACACGCTGCCGCGCGTTCTCGTCGACAACGCCTACTATGCGCAGGTCAGTTCGGCGGCGAAGGACGGCGCGGAGAAGGACTTCCTGGCCGAATGCCTGCAGAACGCGACATGGCTGAAGCGCAGCCTCGACCAGCGCGCCAAAACGATCCTCAAGGTGGCGTCGGAGATCGTGCGCCAGCAGGACGCCTTCCTCGTCCACGGCGTTCGCCACCTGCGCCCGCTCAACATGAAGAGCATCGCCGAGGCGATCGGCATGCATGAATCGACCGTCAGCCGGGTCTCCGCCAACAAATACATGCTCACTCCGCGCGGCGTGTTCGAACTGCGCTATTTCTTCACGCCGGCCATCGCCGGCGCGGGGTCGGCCGAGGCGCACTCCTCGGAAGCCGTCCGCGACCGCATCCGCCAGCTCATCGAGCAGGAAGAGCCGGCGGATGTGCTTTCCGACGACTCGATTGTGGATAAGCTCCGCGAAAACGGCGTCGACATAGCCCGAAGGACCGTCGCCAAGTATCGGGAAGGAATGAACATTCCCTCCTCGGTCGAGCGTCGGCGCGAGAAGAGGGCGCTCGCGGCGCTCGGCTGA
PROTEIN sequence
Length: 504
MGLSARLQLRQSQSLVMTPQLMQSIRLLQLSHAELEAFIDQEIERNPLVERGEDASGAAAGDTPDGADAEPPPESGPEPEWTAASISDRLDASLENVFPDDPGVRERIGPDLAAQWKSAHGGSGTFDGDGFDLEEVVSAPVTLNDHLREQIAFAFTDPVKRAVAAELAGSLDESGYLRTELPEIAARLGIEEETVAETLSTCQGFDPPGIFARDLAECLALQLHARDRLDPAMAALLRNLELLARRDFQALSRLCGVGQEDLLDMLAEIRALDPKPGMAFAGGTADVVVPDVLVRPAPDGSWQVELNPDTLPRVLVDNAYYAQVSSAAKDGAEKDFLAECLQNATWLKRSLDQRAKTILKVASEIVRQQDAFLVHGVRHLRPLNMKSIAEAIGMHESTVSRVSANKYMLTPRGVFELRYFFTPAIAGAGSAEAHSSEAVRDRIRQLIEQEEPADVLSDDSIVDKLRENGVDIARRTVAKYREGMNIPSSVERRREKRALAALG*