ggKbase home page

SCNpilot_cont_500_bf_scaffold_235_207

Organism: SCNPILOT_CONT_500_BF_Mesorhizobium_64_28

partial RP 27 / 55 MC: 1 BSCG 29 / 51 ASCG 10 / 38 MC: 2
Location: 222732..223919

Top 3 Functional Annotations

Value Algorithm Source
RND multidrug efflux membrane permease n=1 Tax=Rhizobium lupini HPC(L) RepID=K5BWI5_RHILU similarity UNIREF
DB: UNIREF100
  • Identity: 64.9
  • Coverage: 387.0
  • Bit_score: 484
  • Evalue 1.10e-133
  • rbh
RND transporter {ECO:0000313|EMBL:KGE80708.1}; TaxID=1510041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. H41.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.6
  • Coverage: 396.0
  • Bit_score: 484
  • Evalue 1.60e-133
Putative component of multidrug efflux pump, acrB/acrD/acrF family similarity KEGG
DB: KEGG
  • Identity: 64.6
  • Coverage: 387.0
  • Bit_score: 482
  • Evalue 1.00e-133
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium sp. H41 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1188
ATGAAACTTTCAGATCGAATCCTTGCGGCTGCCGTCGGCCTGGCCATTCTGGCCGTCGCCGCCTGCACGGAATCGCAGAGTTCGGCGAACCCGCCGGCGGCGCCTCCACCGGCCGTGAGCATCGTCCAGGTGAAGGCGGAGCCGGTTCCGATCGTCAGCGACCTGCCGGGCCGGATCGCGCCCACGCGCATCGCCGAGGTCAGGCCGCGCGTCACCGGCATCGTCGTCAAGCGCGTCTTCGAGCAGGGCAGCCTGGTCAAGGAGGGCGACGTGCTCTACCAGATCGACCCGGCGCCCTTTCGCGTGCAGGTGGAAAGCGCCCAGGCGACGCAGCAGCGCGCGCTCGCCGCGCAGAACCTGGCCCGCCAGCAGGCCGACCGGCAGAAGGAATTGCGCCAGCGCAACATCTCCAGCGCGCAGGATCTCGACACCGCGCTCGCCCAGCTGGCGCAGGCGGACGCCGATGTCGCCGCCGCGCGCGCCGGCCTCGACGCGGCGAAGCTCAATCTGCAATATTCCGACGTGAGGGCGCCGATCAGCGGCCGCATCGGCCGGGCGCTGATCACCGAAGGCGCGCTGGTCAACGCAAACGGTACGGAGAACCTGGCGACGATCCAGCAGCTCGACCCGGTCTATGCCGACTTCACCCAGCCGTCCGCGCAGATGCGGCAGTTGCGAAAGGCACTCAAGGACGGGCTCCTGAAAGGCCCGGCCGAAGGACAGGCGACGGTGAAGCTGCTCTTCGACGACGGCAGCGAATATCCTCGCCCCGGCCGGCTGCTCTTTTCCGAATCGACGGTCGACGAGACGACCGGCCAGATCACCATGCGCGCGGAGTTTCCCAATCCCGACGGCGACCTCCTGCCGGGCATGTATGTGCGCGTCCTGATCGAACAGGCGGTCGACCAGGCGGCCCTGACCGTGCCCGAGCAGGCCGTGCAGCGCGACAGCAGCGGCAAGGCGCTGCTTTATGTCGTCGGCGAAGACAACGTCGCCCAGATGCGCCCGGTGACCGTGGGCAGGACAACCGGCCAGCAGGTGGTGATCACCGGCGGGCTGAAAAGCGGCGAGCGGGTCGTGGTCGAAGGTTTCCAGAAGATCCATCCGGGCGCGAAAGTCGAGCCGGCGGACTGGAAGCCGGCGGCCGATACGCTTTCCAGGACCCAAAGCAAGGCCGACGCCGGTTAG
PROTEIN sequence
Length: 396
MKLSDRILAAAVGLAILAVAACTESQSSANPPAAPPPAVSIVQVKAEPVPIVSDLPGRIAPTRIAEVRPRVTGIVVKRVFEQGSLVKEGDVLYQIDPAPFRVQVESAQATQQRALAAQNLARQQADRQKELRQRNISSAQDLDTALAQLAQADADVAAARAGLDAAKLNLQYSDVRAPISGRIGRALITEGALVNANGTENLATIQQLDPVYADFTQPSAQMRQLRKALKDGLLKGPAEGQATVKLLFDDGSEYPRPGRLLFSESTVDETTGQITMRAEFPNPDGDLLPGMYVRVLIEQAVDQAALTVPEQAVQRDSSGKALLYVVGEDNVAQMRPVTVGRTTGQQVVITGGLKSGERVVVEGFQKIHPGAKVEPADWKPAADTLSRTQSKADAG*