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SCNpilot_cont_500_bf_scaffold_235_244

Organism: SCNPILOT_CONT_500_BF_Mesorhizobium_64_28

partial RP 27 / 55 MC: 1 BSCG 29 / 51 ASCG 10 / 38 MC: 2
Location: comp(263465..264169)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CE1875 related cluster n=1 Tax=unknown RepID=UPI0003CE1875 similarity UNIREF
DB: UNIREF100
  • Identity: 69.0
  • Coverage: 232.0
  • Bit_score: 311
  • Evalue 7.90e-82
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.0
  • Coverage: 232.0
  • Bit_score: 311
  • Evalue 1.10e-81
RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 75.6
  • Coverage: 217.0
  • Bit_score: 308
  • Evalue 1.60e-81

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Taxonomy

Mesorhizobium sp. LNHC252B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 705
ATGGCACAGCCAAGCGTGGAATCGACAGGCACAGCCTTGCAGTCCGACATGGTGCTGGTGGAGCGGGCGTTGGCGCGCGACGCGGATGCCTGCCGCCTTCTCATCAGGACCCATAACCAGCGTCTCTACCGGTTAGCCCGCAGCATCCTGCGCAACGACGGCGAGGCGGAGGATGCGGTGCAGGAGGCCTATATGCGCGCCTTCGCGCATCTGGAAAGCTTCCGGGGCGATTCGGCGCTCTCGACCTGGCTCTCGCGCATCGTCATCAACGAGGCGCTCGGCCGGTTGCGCAACCGCCGCCGGACCGGCGCGGTGGTCATGCCGGAAAGCGGCCGGCACGATCCGGGCGGCGAGGCCCGCATCATTCCCTTCCCCCTAGGATCGAGTGAGGCCGACCCGGAGCGCACGATGGCACAAAGGCAGATACTCACCCTCGTCGAGCGCGCGACGGACGAACTGCCCGAAATCTACCGCACCGTCTTCGTCGCCCGCGTGATCGAAGGGCTGAGCCTCGAGGAGACAGCCGACCTGCTCGGGATCAGGCCCGAGACGGTAAAGACCCGGCTGTTCCGGGCGCGCCGGCTTGTCCGCGAGACGATCGAAAAGGAGGTCGGGCCGGTGCTGATGGACGCATTTCCCTTTGCCGGCCGCCGCTGCGACCGCTTGACCCGGGCGGTGATGCTGCGCCTCGGCCTGGAGGAATGA
PROTEIN sequence
Length: 235
MAQPSVESTGTALQSDMVLVERALARDADACRLLIRTHNQRLYRLARSILRNDGEAEDAVQEAYMRAFAHLESFRGDSALSTWLSRIVINEALGRLRNRRRTGAVVMPESGRHDPGGEARIIPFPLGSSEADPERTMAQRQILTLVERATDELPEIYRTVFVARVIEGLSLEETADLLGIRPETVKTRLFRARRLVRETIEKEVGPVLMDAFPFAGRRCDRLTRAVMLRLGLEE*