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SCNpilot_cont_500_bf_scaffold_287_5

Organism: SCNPILOT_CONT_500_BF_Mesorhizobium_64_28

partial RP 27 / 55 MC: 1 BSCG 29 / 51 ASCG 10 / 38 MC: 2
Location: 2390..2602

Top 3 Functional Annotations

Value Algorithm Source
cold-shock protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000380D88B similarity UNIREF
DB: UNIREF100
  • Identity: 88.4
  • Coverage: 69.0
  • Bit_score: 132
  • Evalue 2.00e-28
cold-shock protein; K03704 cold shock protein (beta-ribbon, CspA family) similarity KEGG
DB: KEGG
  • Identity: 87.0
  • Coverage: 69.0
  • Bit_score: 130
  • Evalue 2.40e-28
Cold-shock protein {ECO:0000313|EMBL:ESY96074.1}; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC229A00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.0
  • Coverage: 69.0
  • Bit_score: 130
  • Evalue 1.10e-27

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Taxonomy

Mesorhizobium sp. LNHC229A00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 213
ATGGCGCAGACTGGAACCGTAAAGTTCTTCAATACCACCAAAGGCTTCGGCTTCATCACGCCGGACGGCGGCGCGAAGGATGTCTTCGTGCACGTCTCGGCCGTGCAGGCTTCCGGGCTGCAGAGCCTGGTCGAGGGCCAGAAGGTGACGTTCGACACCGAGCCGGATCGCATGGGCAAGGGCCCGAAGGCGGTCAATCTCCGCGTCGAGTAG
PROTEIN sequence
Length: 71
MAQTGTVKFFNTTKGFGFITPDGGAKDVFVHVSAVQASGLQSLVEGQKVTFDTEPDRMGKGPKAVNLRVE*