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SCNpilot_cont_500_bf_scaffold_287

Search features with annotation key words

Displaying items 1-30 of 200 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_287_1
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..813)
DNA (813bp) protein (271aa)
UPI0003D041A6 related cluster n=1 Tax=unknown RepID=UPI0003D041A6
UvrABC system protein B {ECO:0000256|RuleBase:RU003587, ECO:0000256|SAAS:SAAS00009141}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
DEAD/DEAH box helicase; K03702 excinuclease ABC subunit B
SCNpilot_cont_500_bf_scaffold_287_2
unknown

Not on your lists

971..1225
DNA (255bp) protein (85aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_287_3
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1216..1473)
DNA (258bp) protein (86aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YAL1_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHH11185.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
hypothetical protein; K15383 MtN3 and saliva related transmembrane protein
SCNpilot_cont_500_bf_scaffold_287_4
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1622..2059)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11JC0_MESSB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG62505.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCNpilot_cont_500_bf_scaffold_287_5
Mesorhizobium sp. LNHC229A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2390..2602
DNA (213bp) protein (71aa)
cold-shock protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000380D88B
cold-shock protein; K03704 cold shock protein (beta-ribbon, CspA family)
Cold-shock protein {ECO:0000313|EMBL:ESY96074.1}; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC229A00.;"
SCNpilot_cont_500_bf_scaffold_287_6
Mesorhizobium sp. LNJC394B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2929..3141
DNA (213bp) protein (71aa)
Cold-shock protein n=5 Tax=Mesorhizobium RepID=V7EYY6_9RHIZ
Cold-shock protein {ECO:0000313|EMBL:ESY23147.1}; TaxID=1287274 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC394B00.;"
cold-shock DNA-binding protein family protein; K03704 cold shock protein (beta-ribbon, CspA family)
SCNpilot_cont_500_bf_scaffold_287_7
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3187..3921)
DNA (735bp) protein (245aa)
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00036F6DF3 rbh
XynB {ECO:0000313|EMBL:ETR75515.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_287_8
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4237..4878)
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI000302B37B
Hydrolase {ECO:0000313|EMBL:EHH11200.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
Zn-dependent hydrolase, glyoxylase
SCNpilot_cont_500_bf_scaffold_287_9
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5222..5512)
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000373886E
Putative uncharacterized protein {ECO:0000313|EMBL:EHK57380.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_287_10
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5674..6567)
DNA (894bp) protein (298aa)
Branched-chain amino-acid aminotransferase {ECO:0000313|EMBL:CDX15839.1}; EC=2.6.1.42 {ECO:0000313|EMBL:CDX15839.1};; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
branched-chain amino acid aminotransferase; K00826 branched-chain amino acid aminotransferase [EC:2.6.1.42] rbh
Putative branched-chain-amino-acid aminotransferase n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EV00_9RHIZ rbh
SCNpilot_cont_500_bf_scaffold_287_11
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6803..7366
DNA (564bp) protein (188aa)
MarR family transcriptional regulator n=1 Tax=Hoeflea sp. 108 RepID=UPI000375C7F5
MarR family transcription regulator {ECO:0000313|EMBL:CDX31402.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
MarR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_287_12
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7379..8083
DNA (705bp) protein (235aa)
UPI0003CE8A21 related cluster n=1 Tax=unknown RepID=UPI0003CE8A21
Chemotaxis protein CheY {ECO:0000313|EMBL:ESY62838.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
winged helix family two component transcriptional regulator; K07659 two-component system, OmpR family, phosphate regulon response regulator OmpR
SCNpilot_cont_500_bf_scaffold_287_13
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8115..8801)
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TXZ8_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCE11336.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_287_14
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8990..10456
DNA (1467bp) protein (489aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
ATPase domain-containing protein; K07638 two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
UPI0003CF5C79 related cluster n=1 Tax=unknown RepID=UPI0003CF5C79
SCNpilot_cont_500_bf_scaffold_287_15
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10572..12452)
DNA (1881bp) protein (627aa)
hypothetical protein n=1 Tax=Fangia hongkongensis RepID=UPI00037BF058
GtrA-like protein {ECO:0000313|EMBL:EWS65914.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. T4.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_287_16
Thalassobacter sp. 16PALIMAR09, Thalassobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12449..13180)
DNA (732bp) protein (244aa)
methyltransferase (EC:2.1.1.-)
type 12 methyltransferase n=1 Tax=Sphingobium chinhatense RepID=UPI000360D08F
Methyltransferase {ECO:0000313|EMBL:KGL00918.1}; TaxID=1225651 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thalassobacter.;" source="Thalassobacter sp. 16PALIMAR09.;"
SCNpilot_cont_500_bf_scaffold_287_17
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13180..14160)
DNA (981bp) protein (327aa)
bactoprenol glucosyl transferase n=1 Tax=Sphingobium chinhatense RepID=UPI00035DE13E rbh
Bactoprenol glucosyl transferase {ECO:0000313|EMBL:KEQ53122.1}; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum.;"
glycosyl transferase family protein
SCNpilot_cont_500_bf_scaffold_287_18
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14344..14700)
DNA (357bp) protein (119aa)
Chaperone n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HPA0_9RHIZ
Protein CsaA {ECO:0000313|EMBL:CDX63442.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
chaperone; K06878 tRNA-binding protein
SCNpilot_cont_500_bf_scaffold_287_19
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14702..15202)
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002ED5100
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV11322.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_cont_500_bf_scaffold_287_20
Mesorhizobium sp. LNJC386A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15534..15848)
DNA (315bp) protein (105aa)
UPI0003CE8D5F related cluster n=1 Tax=unknown RepID=UPI0003CE8D5F
Uncharacterized protein {ECO:0000313|EMBL:ESY38521.1}; TaxID=1287270 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC386A00.;"
hypothetical protein; K09806 hypothetical protein
SCNpilot_cont_500_bf_scaffold_287_21
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16090..17130
DNA (1041bp) protein (347aa)
prolipoprotein diacylglyceryl transferase; K13292 phosphatidylglycerol:prolipoprotein diacylglycerol transferase [EC:2.-.-.-] rbh
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
Prolipoprotein diacylglyceryl transferase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11GD3_MESSB rbh
SCNpilot_cont_500_bf_scaffold_287_22
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17096..18175
DNA (1080bp) protein (360aa)
ATP synthase subunit beta n=1 Tax=Rhizobium loti RepID=UPI00036F1365
Uncharacterized protein {ECO:0000313|EMBL:CDX63449.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_287_23
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18165..18860)
DNA (696bp) protein (232aa)
Putative transcriptional regulator n=1 Tax=Rhizobium sp. CF080 RepID=J3C4D0_9RHIZ rbh
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:EUC01260.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_287_24
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19045..20466
DNA (1422bp) protein (474aa)
FAD/FMN-dependent dehydrogenase n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z1I0_9RHIZ
FAD/FMN-dependent dehydrogenase {ECO:0000313|EMBL:EIM30072.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
oxidoreductase
SCNpilot_cont_500_bf_scaffold_287_25
unknown

Not on your lists

comp(20484..20582)
DNA (99bp) protein (33aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_287_26
Mesorhizobium sp. LNHC220B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20656..21450
DNA (795bp) protein (265aa)
UPI0003CE3CF0 related cluster n=1 Tax=unknown RepID=UPI0003CE3CF0
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC220B00.;"
uncharacterized protein, YfiH family
SCNpilot_cont_500_bf_scaffold_287_27
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21454..22605
DNA (1152bp) protein (384aa)
Xaa-Pro dipeptidase n=1 Tax=Rhizobium loti RepID=UPI00036B568A
Creatinase/Prolidase N-terminal domain protein {ECO:0000313|EMBL:AID32062.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
hydrolase/peptidase
SCNpilot_cont_500_bf_scaffold_287_28
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22667..23236
DNA (570bp) protein (190aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HP91_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK57477.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
lipoprotein
SCNpilot_cont_500_bf_scaffold_287_29
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23330..24262
DNA (933bp) protein (311aa)
ribose-phosphate pyrophosphokinase; K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583, ECO:0000313|EMBL:ABG63547.1}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae
Ribose-phosphate pyrophosphokinase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11GC8_MESSB
SCNpilot_cont_500_bf_scaffold_287_30
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


24503..25159
DNA (657bp) protein (219aa)
50S ribosomal protein L25 n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HP86_9RHIZ
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; K02897 large subunit ribosomal protein L25
Displaying items 1-30 of 200 in total

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