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SCNpilot_cont_500_bf_scaffold_287

Search features with annotation key words

Displaying items 121-150 of 200 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_287_120
Mesorhizobium sp. LNHC229A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

116866..117447
DNA (582bp) protein (194aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KRS5_MESAW
RNA polymerase sigma factor, sigma-70 family
RNA polymerase subunit sigma-70 {ECO:0000313|EMBL:ESY95294.1}; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC229A00.;"
SCNpilot_cont_500_bf_scaffold_287_121
Mesorhizobium sp. L2C085B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

117585..118088
DNA (504bp) protein (168aa)
UPI0003D06C9B related cluster n=1 Tax=unknown RepID=UPI0003D06C9B
Membrane protein {ECO:0000313|EMBL:ESZ15728.1}; TaxID=1287117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C085B000.;"
outer membrane protein; K08995 putative membrane protein
SCNpilot_cont_500_bf_scaffold_287_122
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

118162..118722
DNA (561bp) protein (187aa)
(2Fe-2S)-binding domain protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y705_MESOW
(2Fe-2S)-binding domain-containing protein; K13483 xanthine dehydrogenase YagT iron-sulfur-binding subunit
(2Fe-2S)-binding domain protein {ECO:0000313|EMBL:AEH87475.1}; Flags: Precursor;; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_cont_500_bf_scaffold_287_123
Mesorhizobium sp. LNHC209A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

118724..119746
DNA (1023bp) protein (341aa)
UPI0003D044CC related cluster n=1 Tax=unknown RepID=UPI0003D044CC rbh
Uncharacterized protein {ECO:0000313|EMBL:ESY98787.1}; TaxID=1287226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC209A00.;"
aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein rbh
SCNpilot_cont_500_bf_scaffold_287_124
Mesorhizobium sp. LNHC229A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

119749..122025
DNA (2277bp) protein (759aa)
aldehyde oxidase and xanthine dehydrogenase; K11177 xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4] rbh
UPI0003CED3C1 related cluster n=1 Tax=unknown RepID=UPI0003CED3C1 rbh
Xanthine dehydrogenase {ECO:0000313|EMBL:ESY95246.1}; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC229A00.;"
SCNpilot_cont_500_bf_scaffold_287_125
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(122159..122848)
DNA (690bp) protein (230aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00031DF1E5
Putative uncharacterized protein {ECO:0000313|EMBL:EHK52474.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
smc22-1; osmotically inducible sensory protein
SCNpilot_cont_500_bf_scaffold_287_126
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(122928..123209)
DNA (282bp) protein (94aa)
UPI0003CECB98 related cluster n=1 Tax=unknown RepID=UPI0003CECB98
Uncharacterized protein {ECO:0000313|EMBL:ESW88786.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_287_127
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

123389..124261
DNA (873bp) protein (291aa)
general stress protein 39 (GSP39) (EC:1.-.-.-); K00540 [EC:1.-.-.-]
Short-chain dehydrogenase/reductase SDR n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HZJ1_9RHIZ rbh
Oxidoreductase {ECO:0000313|EMBL:KJB94443.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
SCNpilot_cont_500_bf_scaffold_287_128
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(124295..125605)
DNA (1311bp) protein (437aa)
Monooxygenase FAD-binding protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IWU1_POLGS
Monooxygenase FAD-binding protein
Monooxygenase FAD-binding protein {ECO:0000313|EMBL:ADZ71518.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCNpilot_cont_500_bf_scaffold_287_129
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(125713..127413)
DNA (1701bp) protein (567aa)
Probable adenylate class-3/4/guanylyl cyclase n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3KQE3_RHISN
adenylate class-3/4/guanylyl cyclase
Probable adenylate class-3/4/guanylyl cyclase {ECO:0000313|EMBL:ACP22301.1}; TaxID=394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium sp. (strain NGR234).;"
SCNpilot_cont_500_bf_scaffold_287_130
Burkholderia sp. YI23, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(127503..128144)
DNA (642bp) protein (214aa)
Transcriptional regulatory protein n=1 Tax=Burkholderia sp. YI23 RepID=G8MJ31_9BURK
transcriptional regulator
Transcriptional regulatory protein {ECO:0000313|EMBL:AET93508.1}; TaxID=1097668 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. YI23.;"
SCNpilot_cont_500_bf_scaffold_287_131
Cupriavidus metallidurans, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

128241..129647
DNA (1407bp) protein (469aa)
carotenoid oxygenase n=1 Tax=Cupriavidus sp. BIS7 RepID=UPI0003023C63 rbh
carX; Carotenoid oxygenase; K11159 carotenoid cleavage dioxygenase rbh
Carotenoid oxygenase {ECO:0000313|EMBL:ABF12503.1}; TaxID=266264 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839).;"
SCNpilot_cont_500_bf_scaffold_287_132
Cupriavidus metallidurans, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

129644..130237
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) RepID=Q1LE72_RALME
intracellular septation protein
Uncharacterized protein {ECO:0000313|EMBL:ABF11554.1}; TaxID=266264 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839).;"
SCNpilot_cont_500_bf_scaffold_287_133
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

130336..131898
DNA (1563bp) protein (521aa)
probabable trimethylamine methyltransferase family protein; K14083 trimethylamine methyltransferase [EC:2.1.1.-]
trimethylamine methyltransferase n=1 Tax=Hoeflea sp. 108 RepID=UPI00038042A2 rbh
Trimethylamine methyltransferase {ECO:0000313|EMBL:EZQ15047.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
SCNpilot_cont_500_bf_scaffold_287_134
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

131990..132220
DNA (231bp) protein (77aa)
Uncharacterized protein {ECO:0000313|EMBL:CDN47826.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
SCNpilot_cont_500_bf_scaffold_287_135
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

132533..134587
DNA (2055bp) protein (685aa)
N-methylproline demethylase n=1 Tax=Hoeflea sp. 108 RepID=UPI00036983D2
N-methylproline demethylase (Stahydrine utilization protein stcD) {ECO:0000313|EMBL:EHK55458.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
NADH:flavin oxidoreductase
SCNpilot_cont_500_bf_scaffold_287_136
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

134762..135760
DNA (999bp) protein (333aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036562DE
Fumarylacetoacetate (FAA) hydrolase {ECO:0000313|EMBL:CDX50977.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
fumarylacetoacetate (FAA) hydrolase
SCNpilot_cont_500_bf_scaffold_287_137
Hoeflea phototrophica, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

135853..136785
DNA (933bp) protein (311aa)
Putative dehydrogenase {ECO:0000313|EMBL:EDQ33649.1}; EC=1.1.1.48 {ECO:0000313|EMBL:EDQ33649.1};; TaxID=411684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea phototrophica DFL-43.;"
gal; galactose 1-dehydrogenase Gal (EC:1.1.1.48); K00035 D-galactose 1-dehydrogenase [EC:1.1.1.48] rbh
Putative GFO/IDH/MocA family oxidoreductase n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D736_9RHIZ rbh
SCNpilot_cont_500_bf_scaffold_287_138
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(136827..137558)
DNA (732bp) protein (244aa)
Transcriptional regulator n=1 Tax=Microvirga sp. WSM3557 RepID=I4YUW3_9RHIZ
Transcriptional regulator {ECO:0000313|EMBL:EIM27755.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
GntR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_287_139
Burkholderia glathei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(137658..138662)
DNA (1005bp) protein (335aa)
Inner-membrane translocator n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HLN3_9RHIZ
Sugar ABC transporter permease {ECO:0000313|EMBL:KDR38572.1}; Xylose ABC transporter, permease protein XylH {ECO:0000313|EMBL:CDY78850.1}; TaxID=60547 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glathei.;"
inner-membrane translocator; K10440 ribose transport system permease protein
SCNpilot_cont_500_bf_scaffold_287_140
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(138673..140193)
DNA (1521bp) protein (507aa)
sugar (D-ribose) ABC transporter ATP-binding protein (EC:3.6.3.17); K10441 ribose transport system ATP-binding protein [EC:3.6.3.17]
ABC transporter, ATP-binding protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZVL4_9PROT
D-ribose transporter ATP-binding protein {ECO:0000313|EMBL:KJC62581.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
SCNpilot_cont_500_bf_scaffold_287_141
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(140268..141218)
DNA (951bp) protein (317aa)
Sugar (D-ribose) ABC transporter, periplasmic sugar-binding protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EGZ7_9RHIZ
Sugar (D-ribose) ABC transporter, periplasmic sugar-binding protein {ECO:0000313|EMBL:CCV03854.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
sugar ABC transporter substrate-binding protein; K10439 ribose transport system substrate-binding protein
SCNpilot_cont_500_bf_scaffold_287_142
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

141554..142300
DNA (747bp) protein (249aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002D4F3F8
Probable septum site-determining protein MinC {ECO:0000256|HAMAP-Rule:MF_00267}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
minC; cell division inhibitor protein; K03610 septum site-determining protein MinC
SCNpilot_cont_500_bf_scaffold_287_143
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

142333..143148
DNA (816bp) protein (272aa)
Site-determining protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FLT6_9RHIZ
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
cell division inhibitor MinD; K03609 septum site-determining protein MinD
SCNpilot_cont_500_bf_scaffold_287_144
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

143145..143408
DNA (264bp) protein (88aa)
cell division topological specificity factor n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002F2DBC0
Cell division topological specificity factor {ECO:0000256|HAMAP-Rule:MF_00262, ECO:0000256|SAAS:SAAS00085645}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
minE; cell division topological specificity factor MinE; K03608 cell division topological specificity factor
SCNpilot_cont_500_bf_scaffold_287_145
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(143514..144275)
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI0003820347
GntR family transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
SCNpilot_cont_500_bf_scaffold_287_146
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(144335..145498)
DNA (1164bp) protein (388aa)
Mandelate racemase n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D9Y9_BRAJP
Mandelate racemase {ECO:0000313|EMBL:KGT79822.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
mandelate racemase
SCNpilot_cont_500_bf_scaffold_287_147
Rhizobium sp. CCGE 510, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(145566..146405)
DNA (840bp) protein (280aa)
binding-protein-dependent transport systems inner membrane component n=1 Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002628EDF
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EJT06533.1}; TaxID=1132836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CCGE 510.;"
binding-protein-dependent transport systems inner membrane component; K02026 multiple sugar transport system permease protein
SCNpilot_cont_500_bf_scaffold_287_148
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(146402..147298)
DNA (897bp) protein (299aa)
binding-protein-dependent transport systems inner membrane component n=1 Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002628EE0
ABC transporter permease {ECO:0000313|EMBL:KKB08918.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
binding-protein-dependent transport systems inner membrane component
SCNpilot_cont_500_bf_scaffold_287_149
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(147401..148684)
DNA (1284bp) protein (428aa)
ABC transporter substrate-binding protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00036455FA
extracellular solute-binding protein family 1; K02027 multiple sugar transport system substrate-binding protein
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:ACS59833.1}; Flags: Precursor;; TaxID=395491 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM1325).;"
Displaying items 121-150 of 200 in total

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