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SCNpilot_cont_500_bf_scaffold_287_196

Organism: SCNPILOT_CONT_500_BF_Mesorhizobium_64_28

partial RP 27 / 55 MC: 1 BSCG 29 / 51 ASCG 10 / 38 MC: 2
Location: 192208..192936

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding protein with HTH domain n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KIV6_MESAW similarity UNIREF
DB: UNIREF100
  • Identity: 42.8
  • Coverage: 243.0
  • Bit_score: 194
  • Evalue 1.10e-46
DNA-binding protein with HTH domain similarity KEGG
DB: KEGG
  • Identity: 42.8
  • Coverage: 243.0
  • Bit_score: 194
  • Evalue 3.50e-47
DNA-binding protein with HTH domain {ECO:0000313|EMBL:AGB44475.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.8
  • Coverage: 243.0
  • Bit_score: 194
  • Evalue 1.60e-46

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Taxonomy

Mesorhizobium australicum → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 729
GTGCCGGCGAAATGTCAGGCAATGAACGCAGTCGCATACCCGACGAAAAGCAAAAGACCTGCGGCGGCGATCGCCCGGCGAAGCGATTTCTCCATCGCCCTCATGCAGATATGCCTCGGCATTTCAGCCGAGCACTACATGGTCATCGACACCGCTTGCGGGCCGGACGCGGAACTCCGGATCCTCGCCTCGAACTGGGTCTACGACGCCATCGAGATGGTCGGCCTCGACCATCTCGCGGGACTGGCGCGAAGCCGCGGCGCGACGCCGCTCGGGGGCTCGCCCGAGCCGCTGGTCATCGCGCAGAACAGGAACGGAAACAGCAGGATATGCGGCGACCCTGAATCGGAACTTGCGCGGTTCGGCCACGACGAGATCTACGCGCTGCGGCTTCGCGCCGGCCAGCGCTCCGGCTGCGCCTTCTTTTCCGCTTCCGCTCCCGGCCGCATTCGCCGCAACCTCGTTTCGGCGGCGCAATTCCGTTGCGCCTATCTGCTTTCCGAGATGGCGGATCGGACAGGCAACGGCAATCCGGTCGACCCCTTGTCGGAACGCGAGCGCGAATGCCTTTTCTGGGTGGCCGAAGGCAAGACCACCGAGGAAGTGGCGCTGATCGTCGGCGTCTCGACGAACACCGCCAACCGCTACGTCGCCCAGGCGATCCAAAAGCTCTCGGCGGCCAATCGGTCGAAGGCGGTGGCGACCGCCATCCGCCGGGGCATCCTGTGA
PROTEIN sequence
Length: 243
VPAKCQAMNAVAYPTKSKRPAAAIARRSDFSIALMQICLGISAEHYMVIDTACGPDAELRILASNWVYDAIEMVGLDHLAGLARSRGATPLGGSPEPLVIAQNRNGNSRICGDPESELARFGHDEIYALRLRAGQRSGCAFFSASAPGRIRRNLVSAAQFRCAYLLSEMADRTGNGNPVDPLSERERECLFWVAEGKTTEEVALIVGVSTNTANRYVAQAIQKLSAANRSKAVATAIRRGIL*