ggKbase home page

SCNpilot_cont_500_bf_scaffold_438_5

Organism: SCNPILOT_CONT_500_BF_Mesorhizobium_64_28

partial RP 27 / 55 MC: 1 BSCG 29 / 51 ASCG 10 / 38 MC: 2
Location: comp(4715..5350)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=3 Tax=Escherichia coli RepID=L8C7Y0_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 30.9
  • Coverage: 178.0
  • Bit_score: 94
  • Evalue 1.80e-16
Type VI secretion system-associated protein {ECO:0000313|EMBL:AJD43764.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.0
  • Coverage: 215.0
  • Bit_score: 191
  • Evalue 8.80e-46

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium gallicum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 636
ATGAAAATCATCGCACTCACCACTTTGGCATTTATTGTTGCGGCGCCGGCCACGGCGGAAGATTTGACGGCCAAAGGAGCCGCCTGCGCCATCATTGCCGATTCGCTAGAACGGCTGCATTGCTTCGATGTGGTATTCCCGAAGGGCGCTTCGCCCGAGGCGGCCAATCCGGCTGCGGACCCAATGGCCCCGGAAACAGCACAAGCGAACTGGACCATCACCGAAAGCAAATCGCCGATCGACGACAGCCGCCAGATTGTAGCCTCGCTGAGCCCGAAGAATGTTCAATATACGGGCGTCGGTGAAGGCCAGGCGCTGCTAATCATGCGTTGCCAGGATCACACGACATCGCTTCTCATCGCGACGAATATGTTCATGGTTGACGATACAGCCTCGGTCACCATGAGGGTCGGCGACCAAAAAGCTACGACTACGCGATGGGATCGATCGTCGAACTATAAGGCGGTCGGGCTGTGGAACGGCAACAGGGCAATACCGGCTATAAAGTCGCTCATGGATAGTGCAAATCTGGCTATACGTATTCAGGCGCGCGACCGCCTCGACGCGCAATTCGACCTCGGAAACGTCTCAGCGGCGATCACGAGAATTGCGACGACTTGCGGATGGCCGAAATAG
PROTEIN sequence
Length: 212
MKIIALTTLAFIVAAPATAEDLTAKGAACAIIADSLERLHCFDVVFPKGASPEAANPAADPMAPETAQANWTITESKSPIDDSRQIVASLSPKNVQYTGVGEGQALLIMRCQDHTTSLLIATNMFMVDDTASVTMRVGDQKATTTRWDRSSNYKAVGLWNGNRAIPAIKSLMDSANLAIRIQARDRLDAQFDLGNVSAAITRIATTCGWPK*