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SCNpilot_cont_500_bf_scaffold_438

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_438_1
Candidatus Accumulibacter sp. SK-02, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(88..1038)
DNA (951bp) protein (317aa)
Putative uncharacterized protein n=1 Tax=Escherichia coli XH001 RepID=G2F9J9_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:KFB75430.1}; TaxID=1453999 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-02.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_438_2
Mesorhizobium sp. L2C067A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1408..2619)
DNA (1212bp) protein (404aa)
UPI0003D02C96 related cluster n=1 Tax=unknown RepID=UPI0003D02C96
Integrase {ECO:0000313|EMBL:ESZ31013.1}; TaxID=1287106 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C067A000.;"
phage integrase family protein
SCNpilot_cont_500_bf_scaffold_438_3
Mesorhizobium sp. L103C120A0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2867..3469
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. L103C120A0 RepID=V7HU19_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESZ66668.1}; TaxID=1287086 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C120A0.;"
SCNpilot_cont_500_bf_scaffold_438_4
Mesorhizobium sp. L103C120A0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3483..3980
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. L103C120A0 RepID=V7HRJ2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESZ66669.1}; TaxID=1287086 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C120A0.;"
SCNpilot_cont_500_bf_scaffold_438_trna_1
unknown

Not on your lists

comp(4363..4449)
DNA (87bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_438_5
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4715..5350)
DNA (636bp) protein (212aa)
Uncharacterized protein n=3 Tax=Escherichia coli RepID=L8C7Y0_ECOLX
Type VI secretion system-associated protein {ECO:0000313|EMBL:AJD43764.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
SCNpilot_cont_500_bf_scaffold_438_6
Hoeflea sp. BRH_c9, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5510..5758)
DNA (249bp) protein (83aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000376DB33
Uncharacterized protein {ECO:0000313|EMBL:KJS10056.1}; TaxID=1629712 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BRH_c9.;"
succinoglycan biosynthesis protein ExoI
SCNpilot_cont_500_bf_scaffold_438_7
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5887..6483)
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000362C152
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH87399.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_cont_500_bf_scaffold_438_8
unknown

Not on your lists

comp(6654..6920)
DNA (267bp) protein (89aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_438_9
Mesorhizobium sp. L2C066B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7408..8031
DNA (624bp) protein (208aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00035EF65E
Uncharacterized protein {ECO:0000313|EMBL:ESZ41794.1}; TaxID=1287105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C066B000.;"
Porin subfamily protein
SCNpilot_cont_500_bf_scaffold_438_10
Legionella pneumophila, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8641..9399)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Legionella pneumophila (strain Lens) RepID=Q5WWQ1_LEGPL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAH15641.1}; TaxID=297245 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella pneumophila (strain Lens).;"
SCNpilot_cont_500_bf_scaffold_438_11
unknown

Not on your lists

comp(9569..9751)
DNA (183bp) protein (61aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_438_12
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9864..10397
DNA (534bp) protein (178aa)
UPI0003CF44E2 related cluster n=1 Tax=unknown RepID=UPI0003CF44E2
Fatty acid hydroxylase {ECO:0000313|EMBL:ESY63858.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
sterol desaturase
SCNpilot_cont_500_bf_scaffold_438_13
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10695..11978
DNA (1284bp) protein (428aa)
Rare lipoprotein A n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FAZ5_9RHIZ
Rare lipoprotein A {ECO:0000313|EMBL:CCV13645.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
lipoprotein A; K03642 rare lipoprotein A
SCNpilot_cont_500_bf_scaffold_438_14
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12044..13342
DNA (1299bp) protein (433aa)
Serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4); K07258 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D-alanyl-D-alanine carboxypeptidase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002DE5F30 rbh
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:EHK55235.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
SCNpilot_cont_500_bf_scaffold_438_15
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13493..14140
DNA (648bp) protein (216aa)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
thymidylate kinase; K00943 dTMP kinase [EC:2.7.4.9]
Thymidylate kinase n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BTA5_9RHIZ rbh
SCNpilot_cont_500_bf_scaffold_438_16
Mesorhizobium sp. L103C105A0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14144..15196
DNA (1053bp) protein (351aa)
DNA polymerase III subunit delta'; K02341 DNA polymerase III subunit delta' [EC:2.7.7.7]
UPI0003CFDF6F related cluster n=1 Tax=unknown RepID=UPI0003CFDF6F
DNA polymerase III subunit delta {ECO:0000313|EMBL:ESZ70735.1}; TaxID=1287074 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C105A0.;"
SCNpilot_cont_500_bf_scaffold_438_17
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


15215..16825
DNA (1611bp) protein (537aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00012840}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00012840};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01228}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
Methionine--tRNA ligase n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5F4U7_9RHIZ
methionyl-tRNA synthetase
SCNpilot_cont_500_bf_scaffold_438_18
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16833..17627
DNA (795bp) protein (265aa)
hypothetical protein; K03424 TatD DNase family protein [EC:3.1.21.-]
LuxR family transcriptional regulator n=1 Tax=Rhizobium loti RepID=UPI00037FE8CA
Hydrolase, TatD family protein {ECO:0000313|EMBL:AID30013.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
SCNpilot_cont_500_bf_scaffold_438_19
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17640..18449
DNA (810bp) protein (270aa)
Hydrolase n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BTA9_9RHIZ rbh
Hydrolase {ECO:0000313|EMBL:EIM72811.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
hydrolase; K06167 PhnP protein
SCNpilot_cont_500_bf_scaffold_438_20
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18466..18936
DNA (471bp) protein (157aa)
UPI0003D043C2 related cluster n=1 Tax=unknown RepID=UPI0003D043C2
YbaK/prolyl-tRNA synthetase associated protein {ECO:0000313|EMBL:ESZ19810.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_438_21
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18960..19556
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Pseudochrobactrum sp. AO18b RepID=UPI0003B45D4D
Uncharacterized protein {ECO:0000313|EMBL:CDN51030.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
hypothetical protein; K09975 hypothetical protein
SCNpilot_cont_500_bf_scaffold_438_22
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19666..20919)
DNA (1254bp) protein (418aa)
D-amino acid dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01202}; EC=1.4.99.1 {ECO:0000256|HAMAP-Rule:MF_01202};; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
D-amino acid dehydrogenase small subunit n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2ME28_9RHIZ
glycine/D-amino acid oxidase, deaminating rbh
SCNpilot_cont_500_bf_scaffold_438_23
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20961..21497)
DNA (537bp) protein (179aa)
Putative GreA/GreB family elongation factor n=1 Tax=Rhizobium sp. RepID=L0NCT2_RHISP
Putative GreA/GreB family elongation factor {ECO:0000313|EMBL:CCF18923.1}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_438_24
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21644..22090)
DNA (447bp) protein (149aa)
GreA/GreB family elongation factor n=1 Tax=Rhizobium sp. RepID=L0NF21_RHISP
GreA/GreB family elongation factor {ECO:0000313|EMBL:CCF18922.1}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
nucleoside diphosphate kinase regulator; K06140 regulator of nucleoside diphosphate kinase
SCNpilot_cont_500_bf_scaffold_438_25
Mesorhizobium sp. LSHC412B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22627..23451
DNA (825bp) protein (275aa)
mazG; nucleoside triphosphate pyrophosphohydrolase (EC:3.6.1.19); K04765 ATP diphosphatase [EC:3.6.1.8]
UPI0003CF331F related cluster n=1 Tax=unknown RepID=UPI0003CF331F
Nucleoside triphosphate pyrophosphohydrolase {ECO:0000313|EMBL:ESX81634.1}; TaxID=1287285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC412B00.;"
SCNpilot_cont_500_bf_scaffold_438_26
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23458..24744)
DNA (1287bp) protein (429aa)
UPI0003CDFF8A related cluster n=1 Tax=unknown RepID=UPI0003CDFF8A
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
GTP-binding proten HflX; K03665 GTP-binding protein HflX
SCNpilot_cont_500_bf_scaffold_438_27
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24835..25083)
DNA (249bp) protein (83aa)
RNA-binding protein Hfq n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HWE4_9RHIZ
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
RNA chaperone Hfq; K03666 host factor-I protein
SCNpilot_cont_500_bf_scaffold_438_28
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25231..26094)
DNA (864bp) protein (288aa)
D-amino acid aminotransferase; K00824 D-alanine transaminase [EC:2.6.1.21]
D-alanine aminotransferase apoenzyme {ECO:0000313|EMBL:ABG63009.1}; EC=2.6.1.21 {ECO:0000313|EMBL:ABG63009.1};; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
D-amino acid aminotransferase n=1 Tax=Hoeflea sp. 108 RepID=UPI00036881E8 rbh
SCNpilot_cont_500_bf_scaffold_438_29
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26215..27576)
DNA (1362bp) protein (454aa)
ATPase AAA n=1 Tax=Hoeflea sp. 108 RepID=UPI00035EB810
Nitrogen assimilation regulatory protein {ECO:0000313|EMBL:CDX35755.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains
Displaying items 1-30 of 57 in total

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