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SCNpilot_cont_500_bf_scaffold_446_78

Organism: SCNPILOT_CONT_500_BF_Mesorhizobium_64_28

partial RP 27 / 55 MC: 1 BSCG 29 / 51 ASCG 10 / 38 MC: 2
Location: 55464..56462

Top 3 Functional Annotations

Value Algorithm Source
Retron-type reverse transcriptase n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3CSK1_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 66.1
  • Coverage: 327.0
  • Bit_score: 425
  • Evalue 5.30e-116
Retron-type reverse transcriptase {ECO:0000313|EMBL:EJN11814.1}; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.1
  • Coverage: 327.0
  • Bit_score: 425
  • Evalue 7.50e-116
RNA-directed DNA polymerase similarity KEGG
DB: KEGG
  • Identity: 38.5
  • Coverage: 335.0
  • Bit_score: 227
  • Evalue 6.70e-57

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Taxonomy

Bradyrhizobium sp. YR681 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 999
ATGGCGAAGAAATACCGCAACCTCACCGACCGGATCACGGCCGACGCCACCATGCTCGAGGCATACCGCCTCACGTCGCGCGGCAAGCGGCTGACGCCGGCGCGGCTGGAGTTCAAGGAATTCTCCATCCTCAATCTGGAACAACTGGCGCAGGAGATGCGCACCGGCGCTTACGTCGAGGGCGCGCCGCACGAATTCAATATCTTCGACCCGAAGCTGCGCACCATCTCAGCGCTTCCGTTCCGCGACCGCATCGCCCAGCATGCGCTCTGCCAGGTGATCGCTCCGATCTTCGATGCGACACTGCTTCCACGCACCTTCGCGTGCCGGCCGGGCAAAGGAACCCATCGCGCGGCGATCACGCTTCAGGCCGATCTGCGGCGGCTGTCGGATGACCCCGTCTGTGTCCTCAAGACGGACTTCTCGCGCTATTTCGCATCGATCGGGCGGCCGGTCCTTTGGCAACTTATCGAGACGAAGATTTCCTGCCGGGCCACGTTGCGCCTCATCGATGCCATGCTGCCGCGCGAGGGGATCGGGCTGCCGATCGGCAGCTTGGTCAGCCAGATATTCGCCAATGTGTACGCCGGCGTGGTGGACCGACACCTTCAGCAGGATCTCGGCGAGAGATACTGGTTCCGCTACATGGACGATATCGTCGTACTTGGCCGATCGAGCGAACATCTGCGCGGCGTCAAGGCTTCGATCGAAGCCCTATCTCGTGAGAGGCTCGGCCTTCGTTTCTCGAAATGGAGCATCCAGCCGGCCGCGCGCGGCGTGAACTTTGTCGGCTACCGCATCTGGGCGACCCACAAGCTTCTGCGCCGCGATAGTGTCAGCCGAGCACGCCGCAAGATCCGCGCCTATCGCGCCGCTGGCGACTACCGGCGGCTGGAGAAGTTCCTCGCCGCCTGGACAGGCCACGCGAGCTGGGCCGATTCCAATAATTTGATGAAGAGCCTCGACCTCGATCAGGGAGGAGGATTTCCACGTGGTTGA
PROTEIN sequence
Length: 333
MAKKYRNLTDRITADATMLEAYRLTSRGKRLTPARLEFKEFSILNLEQLAQEMRTGAYVEGAPHEFNIFDPKLRTISALPFRDRIAQHALCQVIAPIFDATLLPRTFACRPGKGTHRAAITLQADLRRLSDDPVCVLKTDFSRYFASIGRPVLWQLIETKISCRATLRLIDAMLPREGIGLPIGSLVSQIFANVYAGVVDRHLQQDLGERYWFRYMDDIVVLGRSSEHLRGVKASIEALSRERLGLRFSKWSIQPAARGVNFVGYRIWATHKLLRRDSVSRARRKIRAYRAAGDYRRLEKFLAAWTGHASWADSNNLMKSLDLDQGGGFPRG*