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SCNpilot_cont_500_bf_scaffold_446_115

Organism: SCNPILOT_CONT_500_BF_Mesorhizobium_64_28

partial RP 27 / 55 MC: 1 BSCG 29 / 51 ASCG 10 / 38 MC: 2
Location: comp(97713..98111)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=1287117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizob similarity UNIPROT
DB: UniProtKB
  • Identity: 83.6
  • Coverage: 134.0
  • Bit_score: 219
  • Evalue 3.20e-54
DNA-directed RNA polymerase subunit omega; K03060 DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 82.8
  • Coverage: 134.0
  • Bit_score: 218
  • Evalue 1.20e-54
UPI0003CF41C7 related cluster n=1 Tax=unknown RepID=UPI0003CF41C7 similarity UNIREF
DB: UNIREF100
  • Identity: 83.6
  • Coverage: 134.0
  • Bit_score: 219
  • Evalue 2.30e-54

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Taxonomy

Mesorhizobium sp. L2C085B000 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 399
ATGGCCCGCGTTACCGTTGAAGACTGCATCGACAAGGTCGACAACCGCTTCGAACTGGTCCTGCTCGCCGGCCATCGCGCCCGGCAGCTTTCGCAGGGTGCGCCGATAACGATCGACCGCGACAACGACAAGAACCCGGTCGTGGCGCTTCGCGAGATCGCCGATGAGACGCTGTCGCCCGGCGACCTCAAGGAAGACCTCATCCATTCGCTGCAGAAGCATGTCGAGATCGACGAGCCGGAGGGCGACACGGCCCCCGAGATCGCCGACCAGACGCAGCCGGCCGCGGCCGATGCCGAAAGCGAGGAAGAGAGCGTCGCCTTCGACCGCATGTCGGAGGAGGATTTGCTGGCCGGCATCGAAGGCCTCGTGCCGCCGGAAAAGAGCGACGATTTCTGA
PROTEIN sequence
Length: 133
MARVTVEDCIDKVDNRFELVLLAGHRARQLSQGAPITIDRDNDKNPVVALREIADETLSPGDLKEDLIHSLQKHVEIDEPEGDTAPEIADQTQPAAADAESEEESVAFDRMSEEDLLAGIEGLVPPEKSDDF*