ggKbase home page

SCNpilot_cont_500_bf_scaffold_6145_2

Organism: SCNPILOT_CONT_500_BF_Mesorhizobium_64_28

partial RP 27 / 55 MC: 1 BSCG 29 / 51 ASCG 10 / 38 MC: 2
Location: 1613..4003

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.7
  • Coverage: 822.0
  • Bit_score: 1414
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta; K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 86.5
  • Coverage: 822.0
  • Bit_score: 1407
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5F4E4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 86.5
  • Coverage: 822.0
  • Bit_score: 1408
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mesorhizobium sp. SOD10 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2391
GTGCGCGACGTCCACGTCACGCATTACGGCCGTATCTGCCCGATCGAGACGCCGGAAGGCCCGAATATCGGCCTTATCAACAGCTTGGCGACTTTTGCTCGCGTCAACAAGTACGGCTTCATCGAAAGCCCGTACCGCAAGATCGTCGACGGCAAGGTGTCGAGCGACGTCGTCTATCTGTCGGCGATGGAGGAGGCCAAGCACTATGTCGCGCAGGCCAACGCCGAGCTCGACAAGAACGGCGCCTTCGCCGAGGAATTCGTCATCTGCCGCCATGCCGGCGAGGTGATGATGGCGCCGCGCGAGAACGTCGACCTGATGGACGTGTCGCCGAAGCAAATGGTGTCCGTCGCCGCGGCGCTCATTCCGTTCCTGGAAAACGACGACGCCAACCGCGCGCTGATGGGCTCGAACATGCAGCGTCAGGCCGTGCCGCTGGTGCGTGCCGAGGCTCCGTTCGTCGGCACCGGCATGGAGCCGGTGGTGGCGCGCGATTCCGGCGCCGCTATCGGCGCCCGCCGCGGCGGCGTGGTCGACCAGGTGGACGCGACGCGTATCGTCATCCGCGCGACCGAGGACATCGAGCCGGGCAGGTCCGGCGTCGATATCTACCGGCTGCAGAAGTTCCAGCGCTCGAACCAGAACACCTGCATCAACCAGCGTCCGCTTGTCCGCATGGGCGACCGTGTGAACAAGGGCGACATCATCGCCGACGGTCCCTCGACCGATCTCGGCGATCTGGCGCTCGGCAGGAACGTGCTCGTCGCGTTCATGCCGTGGAACGGCTACAATTACGAGGACTCCATCCTCCTGTCGGAGCGCATCGTCGCCGACGACGTCTTCACCTCGATCCATATCGAGGAGTTCGAGGTCATGGCGCGCGACACCAAGCTCGGGCCGGAGGAGATCACGCGCGACATCCCGAACGTATCGGAAGAGGCGCTGAAGAACCTCGACGAGGCCGGCATCGTCTATATCGGCGCGGAAGTGCAGCCGGGAGACATCCTGGTCGGCAAGATCACGCCGAAGGGCGAGAGCCCGATGACGCCGGAAGAGAAGCTCCTGCGCGCCATCTTCGGCGAGAAGGCCTCGGATGTCCGTGACACCTCGATGCGGATGCCGCCCGGAGCGTTCGGCACCGTCGTGGAAGTGCGCGTCTTCAACCGCCACGGCGTGGAGAAGGACGAGCGCGCCATGGCGATCGAACGCGAGGAGATCGAGCGTCTGGCCAAGGACCGCGACGACGAGCAGGCGATCCTCGACCGCAACGTCTACAGCCGTCTCGGCGAGATGCTGGAGGGCAAGGAGGCGATAGCGGGGCCGAAGGGCTACAAGAAGGGCGGCAAGCTCACTGCCGAGATCCTGGCGGAGTATCCGCGCTCGCAATGGTGGCAGTTCGCCGTCGACAACGAGAAGCTGCAGGGTCAGCTCGAGGCGCTTCGCGGCCAGTACGACGATTCCAAGAGCGCGCTCGAACAGCGCTTCATGGACAAGGTCGAGAAGGTGCAGCGCGGCGACGAGATGCCGCCCGGCGTGATGAAGATGGTCAAGGTCTNNNNNNNNNNNNNNNNNNNNNNNNTCCTCGAGGACGGCACGCATGTCGACATCGTGCTCAACCCGCTCGGCGTGCCGAGCCGCATGAATGTCGGCCAGATCCTCGAGACGCATCTCGGCTGGGCCTGCGCCGGCATGGGCAGGCAGATCGGCGAACTGATCGAGGCCTACAAGGAGAACGGCAACATCAAGCCGCTGAGGGCCAAGATCGAGGAGCTGATCCCCGCGAACGACCGCAACGAGCCGGTAAAGAGCTACGACGACGAGTCGGTCGTCCGTCTCGCCGACCAGATGAAGCGCGGCGTTTCCATCGCCACGCCCGTCTTCGACGGAGCGCACGAGGCCGACATCAACGGCATGCTGGAAGAGGCGGGCCTCAACAGCAGCGGCCAGTCGACGCTCTATGACGGACGCACGGGCGAGCCGTTCGATCGCAAGGTGACGGTGGGCTACATATATATGCTCAAGCTGCACCATCTCGTGGACGACAAGATCCACGCGCGTTCGATCGGACCGTACAGCCTGGTCACCCAGCAGCCGCTGGGCGGCAAGGCCCAGTTCGGCGGCCAGCGTTTCGGCGAGATGGAAGTGTGGGCGCTCGAAGCCTACGGCGCCGCCTACACGCTGCAGGAGATGCTGACGGTGAAGTCGGACGACGTGGCCGGCCGGACCAAGGTCTACGAGGCGATCGTCCGCGGCGACGACACGTTCGAGGCGGGCATCCCCGAAAGCTTCAACGTGCTGGTCAAGGAAATGCGTTCGCTCGGCCTCAATGTCGAACTGGAGAACACCCAGGTCGAGGAGCAGCCGGTCCGGCTTCCGGACGCCGCCGAATAA
PROTEIN sequence
Length: 797
VRDVHVTHYGRICPIETPEGPNIGLINSLATFARVNKYGFIESPYRKIVDGKVSSDVVYLSAMEEAKHYVAQANAELDKNGAFAEEFVICRHAGEVMMAPRENVDLMDVSPKQMVSVAAALIPFLENDDANRALMGSNMQRQAVPLVRAEAPFVGTGMEPVVARDSGAAIGARRGGVVDQVDATRIVIRATEDIEPGRSGVDIYRLQKFQRSNQNTCINQRPLVRMGDRVNKGDIIADGPSTDLGDLALGRNVLVAFMPWNGYNYEDSILLSERIVADDVFTSIHIEEFEVMARDTKLGPEEITRDIPNVSEEALKNLDEAGIVYIGAEVQPGDILVGKITPKGESPMTPEEKLLRAIFGEKASDVRDTSMRMPPGAFGTVVEVRVFNRHGVEKDERAMAIEREEIERLAKDRDDEQAILDRNVYSRLGEMLEGKEAIAGPKGYKKGGKLTAEILAEYPRSQWWQFAVDNEKLQGQLEALRGQYDDSKSALEQRFMDKVEKVQRGDEMPPGVMKMVKVXXXXXXXXXLEDGTHVDIVLNPLGVPSRMNVGQILETHLGWACAGMGRQIGELIEAYKENGNIKPLRAKIEELIPANDRNEPVKSYDDESVVRLADQMKRGVSIATPVFDGAHEADINGMLEEAGLNSSGQSTLYDGRTGEPFDRKVTVGYIYMLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVAGRTKVYEAIVRGDDTFEAGIPESFNVLVKEMRSLGLNVELENTQVEEQPVRLPDAAE*