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SCNpilot_cont_500_bf_scaffold_6145_1

Organism: SCNPILOT_CONT_500_BF_Mesorhizobium_64_28

partial RP 27 / 55 MC: 1 BSCG 29 / 51 ASCG 10 / 38 MC: 2
Location: 3..1589

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.5
  • Coverage: 506.0
  • Bit_score: 907
  • Evalue 1.00e-260
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 90.3
  • Coverage: 506.0
  • Bit_score: 898
  • Evalue 1.40e-258
DNA-directed RNA polymerase subunit beta n=1 Tax=Hoeflea sp. 108 RepID=UPI0003804411 similarity UNIREF
DB: UNIREF100
  • Identity: 90.1
  • Coverage: 506.0
  • Bit_score: 899
  • Evalue 2.00e-258

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Taxonomy

Pseudomonas bauzanensis → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1587
CGCAGGCGCGTGCGCAAGTTTTTCGGCAAGATCCCCGAAGTCGCGGAGATGCCGAACCTGATCGAGGTCCAGAAGGCCTCCTACGATCAGTTCCTCATGGTCGAGGAGCCGGAGGGCGGCCGTCAGGACGAAGGTCTGCAGGCGGTTTTCAAGTCCGTCTTCCCGATTTCCGATTTTTCGGGCTCTTCGATGCTCGAATTCGTCAAGTACGAGTTCGAGGCGCCGAAGTTCGACGTCGACGAATGCCGTCAGCGCGACCTGACCTATGCGGCGCCGCTCAAGGTGACGCTGCGCCTGATCGTGTTCGATATCGACGAGGACACGCAGGCGAAGTCCATCAAGGACATCAAGGAGCAGGACGTCTATATGGGCGACATGCCGCTCATGACGTCGAACGGCACCTTCATCATCAACGGCACCGAGCGCGTCATCGTCTCGCAGATGCACCGTTCGCCGGGCGTCTTCTTCGACCACGACAAGGGCAAGTCGCACTCCTCGGGCAAGCTTCTGTTCGCGGCGCGCGTCATTCCTTATCGCGGATCGTGGCTCGATATCGAGTTCGATTCCAAGGACATCGTGCATGCGCGCATCGACCGCCGCCGCAAGATCCCGGTGACCAGCCTCCTGATGGCGCTCGGCATGGACGGCGAGGAGATCCTGTCGACCTTCTACGACAAGGTCACCTACACGCGTTCGGGCGACCATTGGCGGATTCCCTTCAACGTCGAGCGTTTCCGCGGCCTGAAGGCCGTCGGCGACCTCGTCGACGCCGACACGGGTGAGGTGGTCGTGGAGGCCGGCAAGAAGATCACGGCGCGCCAGGCGCGGCAGCTTGCCGAGAAGGGCCTGAAGGCGATCAAGGCGACCGATGAGGACCTCGTCGGCTCCTATATCGCCGAAGACATCGTCAACCCCGAGACGGGCGAGATCTATCTCGAGGCGGGCGACGAACTGGAGATGACGACCGACGCCAAGTCGGGCGAGCGCAAGGGCAATCTTGTCCAGCTCCTGGCCTCCGGCGCGGACGAGATCGAAATCCTCGACATCGACCACGTCAATGTCGGCGCCTACATCCGCAATACGCTGGCCGTCGACAAGAACGAGAGCCGGCAGGAAGCGCTGTTCGACATCTACCGCGTGATGCGTCCCGGCGAGCCGCCGACACTGGAGACGGCCGAGGCGATGTTCAAGTCGCTGTTCTTCGACGCCGAGCGCTACGACCTCTCGGCGGTCGGCCGCGTCAAGATGAACATGCGCCTCGAACTGGACTGCCCGGACACCGTGCGCGTGCTGCGCAAGGAAGACATCCTGGCGGTCGTCAAGACGCTGGTCGAACTGCGCGACGGCAAGGGCGAGATCGACGACATCGACAATCTCGGCAACCGGCGCGTGCGTTCGGTCGGCGAGTTGATGGAGAACCAGTACCGCGTCGGCCTGCTTCGCATGGAGCGCGCGATCAAGGAGCGCATGTCCTCGATCGAGATCGACACGGTCATGCCGCAGGACCTGATCAACGCCACCAGACCAACCCGCTCTCCGAGATCACGCACAAGCGTCGTCTCTCGGCGCTCGGGCCGGGCGGCCTGA
PROTEIN sequence
Length: 529
RRRVRKFFGKIPEVAEMPNLIEVQKASYDQFLMVEEPEGGRQDEGLQAVFKSVFPISDFSGSSMLEFVKYEFEAPKFDVDECRQRDLTYAAPLKVTLRLIVFDIDEDTQAKSIKDIKEQDVYMGDMPLMTSNGTFIINGTERVIVSQMHRSPGVFFDHDKGKSHSSGKLLFAARVIPYRGSWLDIEFDSKDIVHARIDRRRKIPVTSLLMALGMDGEEILSTFYDKVTYTRSGDHWRIPFNVERFRGLKAVGDLVDADTGEVVVEAGKKITARQARQLAEKGLKAIKATDEDLVGSYIAEDIVNPETGEIYLEAGDELEMTTDAKSGERKGNLVQLLASGADEIEILDIDHVNVGAYIRNTLAVDKNESRQEALFDIYRVMRPGEPPTLETAEAMFKSLFFDAERYDLSAVGRVKMNMRLELDCPDTVRVLRKEDILAVVKTLVELRDGKGEIDDIDNLGNRRVRSVGELMENQYRVGLLRMERAIKERMSSIEIDTVMPQDLINATRPTRSPRSRTSVVSRRSGRAA*