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SCNpilot_cont_500_bf_scaffold_5443

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_5443_1
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..1140
DNA (1140bp) protein (380aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
Integral membrane sensor signal transduction histidine kinase kinase TctE n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V3T4_9RHIZ rbh
two-component sensor histidine kinase protein rbh
SCNpilot_cont_500_bf_scaffold_5443_2
Burkholderia sp. CCGE1002, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1795..3288
DNA (1494bp) protein (498aa)
diguanylate cyclase n=1 Tax=Burkholderia sp. WSM4176 RepID=UPI000382D39D
diguanylate cyclase
Diguanylate cyclase {ECO:0000313|EMBL:ADG14265.1}; TaxID=640511 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. (strain CCGE1002).;"
SCNpilot_cont_500_bf_scaffold_5443_3
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3321..4181)
DNA (861bp) protein (287aa)
Glycosyl transferase, family 25 n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11IK4_MESSB
glycosyl transferase family protein; K07270 glycosyl transferase, family 25
Glycosyl transferase, family 25 {ECO:0000313|EMBL:ABG62771.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCNpilot_cont_500_bf_scaffold_5443_4
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4380..4994
DNA (615bp) protein (205aa)
Integrase n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SAC4_9RHIZ
Integrase {ECO:0000313|EMBL:AHB47706.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
integrase family protein
SCNpilot_cont_500_bf_scaffold_5443_5
Phaeospirillum molischianum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5027..5290)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FWW5_PHAMO
Uncharacterized protein {ECO:0000313|EMBL:CCG42853.1}; TaxID=1150626 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum molischianum DSM 120.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_5443_6
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5302..5517)
DNA (216bp) protein (72aa)
UPI0003D66281 related cluster n=1 Tax=unknown RepID=UPI0003D66281
Uncharacterized protein {ECO:0000313|EMBL:ETI59604.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_5443_7
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5630..5983
DNA (354bp) protein (118aa)
Transcriptional regulator n=1 Tax=Nostoc sp. (strain PCC 7120 / UTEX 2576) RepID=Q8ZS25_NOSS1
Strain MEJ076 contig_12, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ01825.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
transcriptional regulator
SCNpilot_cont_500_bf_scaffold_5443_8
Synechocystis sp. PCC 6803, Synechocystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

5994..6590
DNA (597bp) protein (199aa)
Slr6057 protein n=2 Tax=Synechocystis sp. PCC 6803 RepID=Q6YRU7_SYNY3
hypothetical protein
Slr6057 protein {ECO:0000313|EMBL:BAD02114.1}; TaxID=1111708 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechocystis.;" source="Synechocystis sp. (strain PCC 6803 / Kazusa).;"
SCNpilot_cont_500_bf_scaffold_5443_9
Acidomonas methanolica, Acidomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6616..7098)
DNA (483bp) protein (161aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=1231351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidomonas.;" source="Acidomonas methanolica NBRC 104435.;"
DNA-methyltransferase (Hemagglutinin-associated protein) n=1 Tax=Rhizobium sp. CCGE 510 RepID=J5Q4F7_9RHIZ
DNA methylase N-4/N-6 domain-containing protein
SCNpilot_cont_500_bf_scaffold_5443_10
unknown

Not on your lists

comp(7189..7404)
DNA (216bp) protein (72aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_5443_11
Thalassospira profundimaris, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7401..7622)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2LDB4_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKF06935.1}; TaxID=1177928 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira profundimaris WP0211.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_5443_12
unknown

Not on your lists

comp(8114..8326)
DNA (213bp) protein (71aa)

This feature has no annotations

Displaying 12 items

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