ggKbase home page

SCNpilot_cont_500_bf_scaffold_5474

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_5474_1
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26..667)
DNA (642bp) protein (214aa)
dihydrofolate reductase-like protein (EC:1.5.1.3)
Dihydrofolate reductase protein n=1 Tax=Azospirillum amazonense Y2 RepID=G1XXC1_9PROT rbh
Dihydrofolate reductase protein {ECO:0000313|EMBL:EGY02084.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;"
SCNpilot_cont_500_bf_scaffold_5474_2
Rhizobium sp. Pop5, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

764..1288
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. Pop5 RepID=K0W116_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJZ17364.1}; TaxID=1223565 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. Pop5.;"
transcriptional regulator protein
SCNpilot_cont_500_bf_scaffold_5474_3
Pseudovibrio sp. JE062, Pseudovibrio, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1410..2378
DNA (969bp) protein (323aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003692F6B rbh
Pyrimidine-specific ribonucleoside hydrolase RihA {ECO:0000313|EMBL:EEA92641.1}; TaxID=439495 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Pseudovibrio.;" source="Pseudovibrio sp. JE062.;"
rihA; pyrimidine-specific ribonucleoside hydrolase RihA (Cytidine/uridine-specific hydrolase) rbh
SCNpilot_cont_500_bf_scaffold_5474_4
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2390..3049)
DNA (660bp) protein (220aa)
Putative periplasmic ligand-binding sensor protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D6ZZP7_STAND
periplasmic ligand-binding sensor protein; K09945 hypothetical protein
Putative periplasmic ligand-binding sensor protein {ECO:0000313|EMBL:ADH91242.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
SCNpilot_cont_500_bf_scaffold_5474_5
Nocardia brasiliensis, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3186..4208)
DNA (1023bp) protein (341aa)
LacI family transcription regulator n=1 Tax=Nocardia sp. BMG111209 RepID=UPI00036A5C3A
LacI family transcriptional regulator
LacI family transcriptional regulator {ECO:0000313|EMBL:AFU01025.1}; TaxID=1133849 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia brasiliensis ATCC 700358.;"
SCNpilot_cont_500_bf_scaffold_5474_6
Geitlerinema sp. PCC 7407, Geitlerinema, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(4282..5166)
DNA (885bp) protein (295aa)
arylformamidase (EC:3.5.1.9) rbh
Arylformamidase {ECO:0000313|EMBL:AFY66624.1}; EC=3.5.1.9 {ECO:0000313|EMBL:AFY66624.1};; TaxID=1173025 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Geitlerinema.;" source="Geitlerinema sp. PCC 7407.;"
Arylformamidase n=1 Tax=Geitlerinema sp. PCC 7407 RepID=K9SA17_9CYAN rbh
SCNpilot_cont_500_bf_scaffold_5474_7
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5443..6225
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=Nonomuraea coxensis RepID=UPI000378CC50
Cytoplasmic protein {ECO:0000313|EMBL:KFL31084.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_5474_8
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6222..7154
DNA (933bp) protein (311aa)
Ribonucleoside hydrolase 1 {ECO:0000313|EMBL:CDX31678.1}; EC=3.2.2.- {ECO:0000313|EMBL:CDX31678.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
rihA; ribonucleoside hydrolase 1 (EC:3.2.2.1); K01250 pyrimidine-specific ribonucleoside hydrolase [EC:3.2.-.-]
Inosine-uridine preferring nucleoside hydrolase n=1 Tax=Streptomyces clavuligerus (strain ATCC 27064 / DSM 738 / JCM 4710 / NBRC 13307 / NCIMB 12785 / NRRL 3585 / VKM Ac-602) RepID=E2Q656_STRC2
SCNpilot_cont_500_bf_scaffold_5474_9
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7177..8034
DNA (858bp) protein (286aa)
hypothetical protein n=1 Tax=Leucobacter salsicius RepID=UPI0003459EA0
ABC transporter substrate binding protein {ECO:0000313|EMBL:CDX17052.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
ABC transporter substrate binding protein; K07335 basic membrane protein A and related proteins
Displaying 9 items

View Taxonomy